Gene : EMB2777 A. thaliana TAIR10
Primary Identifier:  ? AT2G43650 Defline:  (1 of 2) K14767 - U3 small nucleolar RNA-associated protein 3 (UTP3, SAS10)
Genomic Order:  3772 Name:  ? AT2G43650
Secondary Identifier:  ? PAC:19640853
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43650 0.5kb upstream 0.5kb upstream 4608 true Chr2: 18098738-18103345 Arabidopsis thaliana
AT2G43650 0.5kb upstream 0.5kb upstream 500 false Chr2: 18098738-18099237 Arabidopsis thaliana
AT2G43650 0.5kb downstream 0.5kb downstream 4608 true Chr2: 18099238-18103845 Arabidopsis thaliana
AT2G43650 0.5kb downstream 0.5kb downstream 500 false Chr2: 18103346-18103845 Arabidopsis thaliana
AT2G43650 1.0kb upstream 1.0kb upstream 5108 true Chr2: 18098238-18103345 Arabidopsis thaliana
AT2G43650 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18098238-18099237 Arabidopsis thaliana
AT2G43650 1.0kb downstream 1.0kb downstream 5108 true Chr2: 18099238-18104345 Arabidopsis thaliana
AT2G43650 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18103346-18104345 Arabidopsis thaliana
AT2G43650 2.0kb upstream 2.0kb upstream 6108 true Chr2: 18097238-18103345 Arabidopsis thaliana
AT2G43650 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18097238-18099237 Arabidopsis thaliana
AT2G43650 2.0kb downstream 2.0kb downstream 6108 true Chr2: 18099238-18105345 Arabidopsis thaliana
AT2G43650 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18103346-18105345 Arabidopsis thaliana
AT2G43650 5.0kb upstream 5.0kb upstream 9108 true Chr2: 18094238-18103345 Arabidopsis thaliana
AT2G43650 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18094238-18099237 Arabidopsis thaliana
AT2G43650 5.0kb downstream 5.0kb downstream 9108 true Chr2: 18099238-18108345 Arabidopsis thaliana
AT2G43650 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18103346-18108345 Arabidopsis thaliana
AT2G43650 10.0kb upstream 10.0kb upstream 14108 true Chr2: 18089238-18103345 Arabidopsis thaliana
AT2G43650 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18089238-18099237 Arabidopsis thaliana
AT2G43650 10.0kb downstream 10.0kb downstream 14108 true Chr2: 18099238-18113345 Arabidopsis thaliana
AT2G43650 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18103346-18113345 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
122369974 5261 Brassicaceae View MSA
123829267 5264 Brassicales-Malvales View MSA
124338198 5266 SBM View MSA
124243762 5268 Malvidae View MSA
124067196 5270 Rosid View MSA
123744956 5271 Pentapetalae View MSA
122793458 5272 Eudicot View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.842        
cufflinks 11.012        
cufflinks 6.742       Low
cufflinks 12.702        
cufflinks 5.972       Low
cufflinks 14.314       High

0 Strain