Gene : AT2G42330 A. thaliana TAIR10
Defline:  (1 of 2) K13103 - tuftelin-interacting protein 11 (TFIP11) Genomic Order:  3633
Name:  ? AT2G42330 Secondary Identifier:  ? PAC:19641549
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42330 0.5kb upstream 0.5kb upstream 4071 true Chr2: 17630729-17634799 Arabidopsis thaliana
AT2G42330 0.5kb upstream 0.5kb upstream 500 false Chr2: 17634300-17634799 Arabidopsis thaliana
AT2G42330 0.5kb downstream 0.5kb downstream 4071 true Chr2: 17630229-17634299 Arabidopsis thaliana
AT2G42330 0.5kb downstream 0.5kb downstream 500 false Chr2: 17630229-17630728 Arabidopsis thaliana
AT2G42330 1.0kb upstream 1.0kb upstream 4571 true Chr2: 17630729-17635299 Arabidopsis thaliana
AT2G42330 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17634300-17635299 Arabidopsis thaliana
AT2G42330 1.0kb downstream 1.0kb downstream 4571 true Chr2: 17629729-17634299 Arabidopsis thaliana
AT2G42330 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17629729-17630728 Arabidopsis thaliana
AT2G42330 2.0kb upstream 2.0kb upstream 5571 true Chr2: 17630729-17636299 Arabidopsis thaliana
AT2G42330 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17634300-17636299 Arabidopsis thaliana
AT2G42330 2.0kb downstream 2.0kb downstream 5571 true Chr2: 17628729-17634299 Arabidopsis thaliana
AT2G42330 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17628729-17630728 Arabidopsis thaliana
AT2G42330 5.0kb upstream 5.0kb upstream 8571 true Chr2: 17630729-17639299 Arabidopsis thaliana
AT2G42330 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17634300-17639299 Arabidopsis thaliana
AT2G42330 5.0kb downstream 5.0kb downstream 8571 true Chr2: 17625729-17634299 Arabidopsis thaliana
AT2G42330 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17625729-17630728 Arabidopsis thaliana
AT2G42330 10.0kb upstream 10.0kb upstream 13571 true Chr2: 17630729-17644299 Arabidopsis thaliana
AT2G42330 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17634300-17644299 Arabidopsis thaliana
AT2G42330 10.0kb downstream 10.0kb downstream 13571 true Chr2: 17620729-17634299 Arabidopsis thaliana
AT2G42330 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17620729-17630728 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029834 5273 Angiosperm View MSA
122343226 5261 Brassicaceae View MSA
123783487 5264 Brassicales-Malvales View MSA
124281718 5266 SBM View MSA
124136428 5268 Malvidae View MSA
123864291 5270 Rosid View MSA
123449616 5271 Pentapetalae View MSA
122485147 5272 Eudicot View MSA
121299104 5274 Embryophyte View MSA
123337022 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.651        
cufflinks 7.113       High
cufflinks 3.669        
cufflinks 7.165       High
cufflinks 3.634        
cufflinks 4.917        

0 Strain