Gene : AT2G47350 A. thaliana TAIR10
Defline:  (1 of 3) PF04795 - PAPA-1-like conserved region (PAPA-1) Genomic Order:  4163
Name:  ? AT2G47350 Secondary Identifier:  ? PAC:19641935
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47350 0.5kb upstream 0.5kb upstream 3959 true Chr2: 19433291-19437249 Arabidopsis thaliana
AT2G47350 0.5kb upstream 0.5kb upstream 500 false Chr2: 19433291-19433790 Arabidopsis thaliana
AT2G47350 0.5kb downstream 0.5kb downstream 3959 true Chr2: 19433791-19437749 Arabidopsis thaliana
AT2G47350 0.5kb downstream 0.5kb downstream 500 false Chr2: 19437250-19437749 Arabidopsis thaliana
AT2G47350 1.0kb upstream 1.0kb upstream 4459 true Chr2: 19432791-19437249 Arabidopsis thaliana
AT2G47350 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19432791-19433790 Arabidopsis thaliana
AT2G47350 1.0kb downstream 1.0kb downstream 4459 true Chr2: 19433791-19438249 Arabidopsis thaliana
AT2G47350 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19437250-19438249 Arabidopsis thaliana
AT2G47350 2.0kb upstream 2.0kb upstream 5459 true Chr2: 19431791-19437249 Arabidopsis thaliana
AT2G47350 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19431791-19433790 Arabidopsis thaliana
AT2G47350 2.0kb downstream 2.0kb downstream 5459 true Chr2: 19433791-19439249 Arabidopsis thaliana
AT2G47350 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19437250-19439249 Arabidopsis thaliana
AT2G47350 5.0kb upstream 5.0kb upstream 8459 true Chr2: 19428791-19437249 Arabidopsis thaliana
AT2G47350 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19428791-19433790 Arabidopsis thaliana
AT2G47350 5.0kb downstream 5.0kb downstream 8459 true Chr2: 19433791-19442249 Arabidopsis thaliana
AT2G47350 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19437250-19442249 Arabidopsis thaliana
AT2G47350 10.0kb upstream 10.0kb upstream 13459 true Chr2: 19423791-19437249 Arabidopsis thaliana
AT2G47350 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19423791-19433790 Arabidopsis thaliana
AT2G47350 10.0kb downstream 10.0kb downstream 13459 true Chr2: 19433791-19447249 Arabidopsis thaliana
AT2G47350 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19437250-19447249 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041502 5273 Angiosperm View MSA
122369675 5261 Brassicaceae View MSA
123831383 5264 Brassicales-Malvales View MSA
124336529 5266 SBM View MSA
124246611 5268 Malvidae View MSA
124071292 5270 Rosid View MSA
123742118 5271 Pentapetalae View MSA
122796664 5272 Eudicot View MSA
121348202 5274 Embryophyte View MSA
123380771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.13        
cufflinks 3.048        
cufflinks 1.806       Low
cufflinks 3.18       High
cufflinks 1.991        
cufflinks 2.876        

0 Strain