Gene : scpl26 A. thaliana TAIR10
Primary Identifier:  ? AT2G35780 Defline:  (1 of 2) PTHR11802//PTHR11802:SF71 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SERINE CARBOXYPEPTIDASE-LIKE 26-RELATED
Genomic Order:  2922 Name:  ? AT2G35780
Secondary Identifier:  ? PAC:19639027
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G35780 0.5kb upstream 0.5kb upstream 2966 true Chr2: 15037662-15040627 Arabidopsis thaliana
AT2G35780 0.5kb upstream 0.5kb upstream 500 false Chr2: 15040128-15040627 Arabidopsis thaliana
AT2G35780 0.5kb downstream 0.5kb downstream 2966 true Chr2: 15037162-15040127 Arabidopsis thaliana
AT2G35780 0.5kb downstream 0.5kb downstream 500 false Chr2: 15037162-15037661 Arabidopsis thaliana
AT2G35780 1.0kb upstream 1.0kb upstream 3466 true Chr2: 15037662-15041127 Arabidopsis thaliana
AT2G35780 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15040128-15041127 Arabidopsis thaliana
AT2G35780 1.0kb downstream 1.0kb downstream 3466 true Chr2: 15036662-15040127 Arabidopsis thaliana
AT2G35780 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15036662-15037661 Arabidopsis thaliana
AT2G35780 2.0kb upstream 2.0kb upstream 4466 true Chr2: 15037662-15042127 Arabidopsis thaliana
AT2G35780 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15040128-15042127 Arabidopsis thaliana
AT2G35780 2.0kb downstream 2.0kb downstream 4466 true Chr2: 15035662-15040127 Arabidopsis thaliana
AT2G35780 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15035662-15037661 Arabidopsis thaliana
AT2G35780 5.0kb upstream 5.0kb upstream 7466 true Chr2: 15037662-15045127 Arabidopsis thaliana
AT2G35780 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15040128-15045127 Arabidopsis thaliana
AT2G35780 5.0kb downstream 5.0kb downstream 7466 true Chr2: 15032662-15040127 Arabidopsis thaliana
AT2G35780 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15032662-15037661 Arabidopsis thaliana
AT2G35780 10.0kb upstream 10.0kb upstream 12466 true Chr2: 15037662-15050127 Arabidopsis thaliana
AT2G35780 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15040128-15050127 Arabidopsis thaliana
AT2G35780 10.0kb downstream 10.0kb downstream 12466 true Chr2: 15027662-15040127 Arabidopsis thaliana
AT2G35780 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15027662-15037661 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362194 5261 Brassicaceae View MSA
123798325 5264 Brassicales-Malvales View MSA
124295979 5266 SBM View MSA
124148267 5268 Malvidae View MSA
123874296 5270 Rosid View MSA
123458291 5271 Pentapetalae View MSA
122493697 5272 Eudicot View MSA
122046217 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.691        
cufflinks 13.469        
cufflinks 27.842     High High
cufflinks 11.347       Low
cufflinks 23.608        
cufflinks 14.716        

0 Strain