Gene : LHCB4.3 A. thaliana TAIR10
Primary Identifier:  ? AT2G40100 Defline:  (1 of 1) PTHR21649//PTHR21649:SF32 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC
Genomic Order:  3387 Name:  ? AT2G40100
Secondary Identifier:  ? PAC:19642257
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40100 0.5kb upstream 0.5kb upstream 2248 true Chr2: 16745153-16747400 Arabidopsis thaliana
AT2G40100 0.5kb upstream 0.5kb upstream 500 false Chr2: 16745153-16745652 Arabidopsis thaliana
AT2G40100 0.5kb downstream 0.5kb downstream 2248 true Chr2: 16745653-16747900 Arabidopsis thaliana
AT2G40100 0.5kb downstream 0.5kb downstream 500 false Chr2: 16747401-16747900 Arabidopsis thaliana
AT2G40100 1.0kb upstream 1.0kb upstream 2748 true Chr2: 16744653-16747400 Arabidopsis thaliana
AT2G40100 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16744653-16745652 Arabidopsis thaliana
AT2G40100 1.0kb downstream 1.0kb downstream 2748 true Chr2: 16745653-16748400 Arabidopsis thaliana
AT2G40100 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16747401-16748400 Arabidopsis thaliana
AT2G40100 2.0kb upstream 2.0kb upstream 3748 true Chr2: 16743653-16747400 Arabidopsis thaliana
AT2G40100 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16743653-16745652 Arabidopsis thaliana
AT2G40100 2.0kb downstream 2.0kb downstream 3748 true Chr2: 16745653-16749400 Arabidopsis thaliana
AT2G40100 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16747401-16749400 Arabidopsis thaliana
AT2G40100 5.0kb upstream 5.0kb upstream 6748 true Chr2: 16740653-16747400 Arabidopsis thaliana
AT2G40100 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16740653-16745652 Arabidopsis thaliana
AT2G40100 5.0kb downstream 5.0kb downstream 6748 true Chr2: 16745653-16752400 Arabidopsis thaliana
AT2G40100 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16747401-16752400 Arabidopsis thaliana
AT2G40100 10.0kb upstream 10.0kb upstream 11748 true Chr2: 16735653-16747400 Arabidopsis thaliana
AT2G40100 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16735653-16745652 Arabidopsis thaliana
AT2G40100 10.0kb downstream 10.0kb downstream 11748 true Chr2: 16745653-16757400 Arabidopsis thaliana
AT2G40100 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16747401-16757400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780059 5273 Angiosperm View MSA
122368549 5261 Brassicaceae View MSA
123830250 5264 Brassicales-Malvales View MSA
124342149 5266 SBM View MSA
124236937 5268 Malvidae View MSA
124050329 5270 Rosid View MSA
123744936 5271 Pentapetalae View MSA
122771305 5272 Eudicot View MSA
121051692 5274 Embryophyte View MSA
123428168 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.231     High High
cufflinks 0.171     Low  
cufflinks 21.704        
cufflinks 0.384     Low  
cufflinks 25.371        
cufflinks 0.145     Low Low

0 Strain