Gene : PSRP4 A. thaliana TAIR10
Primary Identifier:  ? AT2G38140 Defline:  (1 of 1) PTHR34550//PTHR34550:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC
Genomic Order:  3176 Name:  ? AT2G38140
Secondary Identifier:  ? PAC:19639444
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38140 0.5kb upstream 0.5kb upstream 1230 true Chr2: 15980383-15981612 Arabidopsis thaliana
AT2G38140 0.5kb upstream 0.5kb upstream 500 false Chr2: 15980383-15980882 Arabidopsis thaliana
AT2G38140 0.5kb downstream 0.5kb downstream 1230 true Chr2: 15980883-15982112 Arabidopsis thaliana
AT2G38140 0.5kb downstream 0.5kb downstream 500 false Chr2: 15981613-15982112 Arabidopsis thaliana
AT2G38140 1.0kb upstream 1.0kb upstream 1730 true Chr2: 15979883-15981612 Arabidopsis thaliana
AT2G38140 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15979883-15980882 Arabidopsis thaliana
AT2G38140 1.0kb downstream 1.0kb downstream 1730 true Chr2: 15980883-15982612 Arabidopsis thaliana
AT2G38140 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15981613-15982612 Arabidopsis thaliana
AT2G38140 2.0kb upstream 2.0kb upstream 2730 true Chr2: 15978883-15981612 Arabidopsis thaliana
AT2G38140 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15978883-15980882 Arabidopsis thaliana
AT2G38140 2.0kb downstream 2.0kb downstream 2730 true Chr2: 15980883-15983612 Arabidopsis thaliana
AT2G38140 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15981613-15983612 Arabidopsis thaliana
AT2G38140 5.0kb upstream 5.0kb upstream 5730 true Chr2: 15975883-15981612 Arabidopsis thaliana
AT2G38140 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15975883-15980882 Arabidopsis thaliana
AT2G38140 5.0kb downstream 5.0kb downstream 5730 true Chr2: 15980883-15986612 Arabidopsis thaliana
AT2G38140 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15981613-15986612 Arabidopsis thaliana
AT2G38140 10.0kb upstream 10.0kb upstream 10730 true Chr2: 15970883-15981612 Arabidopsis thaliana
AT2G38140 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15970883-15980882 Arabidopsis thaliana
AT2G38140 10.0kb downstream 10.0kb downstream 10730 true Chr2: 15980883-15991612 Arabidopsis thaliana
AT2G38140 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15981613-15991612 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377348 5261 Brassicaceae View MSA
123833826 5264 Brassicales-Malvales View MSA
124337512 5266 SBM View MSA
124238137 5268 Malvidae View MSA
124067793 5270 Rosid View MSA
123752888 5271 Pentapetalae View MSA
122792825 5272 Eudicot View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 207.737     High  
cufflinks 19.41        
cufflinks 285.306     High High
cufflinks 18.062        
cufflinks 193.135     High  
cufflinks 18.124        

0 Strain