Gene : CAC3 A. thaliana TAIR10
Primary Identifier:  ? AT2G38040 Defline:  (1 of 1) K01962 - acetyl-CoA carboxylase carboxyl transferase subunit alpha (accA)
Genomic Order:  3166 Name:  ? AT2G38040
Secondary Identifier:  ? PAC:19643282
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1264 Arabidopsis thaliana pathologic  
Athaliana PWY-4381 Arabidopsis thaliana pathologic  
Athaliana PWY-5156 Arabidopsis thaliana pathologic  
Athaliana PWY-7388 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38040 0.5kb upstream 0.5kb upstream 4578 true Chr2: 15916593-15921170 Arabidopsis thaliana
AT2G38040 0.5kb upstream 0.5kb upstream 500 false Chr2: 15916593-15917092 Arabidopsis thaliana
AT2G38040 0.5kb downstream 0.5kb downstream 4578 true Chr2: 15917093-15921670 Arabidopsis thaliana
AT2G38040 0.5kb downstream 0.5kb downstream 500 false Chr2: 15921171-15921670 Arabidopsis thaliana
AT2G38040 1.0kb upstream 1.0kb upstream 5078 true Chr2: 15916093-15921170 Arabidopsis thaliana
AT2G38040 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15916093-15917092 Arabidopsis thaliana
AT2G38040 1.0kb downstream 1.0kb downstream 5078 true Chr2: 15917093-15922170 Arabidopsis thaliana
AT2G38040 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15921171-15922170 Arabidopsis thaliana
AT2G38040 2.0kb upstream 2.0kb upstream 6078 true Chr2: 15915093-15921170 Arabidopsis thaliana
AT2G38040 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15915093-15917092 Arabidopsis thaliana
AT2G38040 2.0kb downstream 2.0kb downstream 6078 true Chr2: 15917093-15923170 Arabidopsis thaliana
AT2G38040 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15921171-15923170 Arabidopsis thaliana
AT2G38040 5.0kb upstream 5.0kb upstream 9078 true Chr2: 15912093-15921170 Arabidopsis thaliana
AT2G38040 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15912093-15917092 Arabidopsis thaliana
AT2G38040 5.0kb downstream 5.0kb downstream 9078 true Chr2: 15917093-15926170 Arabidopsis thaliana
AT2G38040 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15921171-15926170 Arabidopsis thaliana
AT2G38040 10.0kb upstream 10.0kb upstream 14078 true Chr2: 15907093-15921170 Arabidopsis thaliana
AT2G38040 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15907093-15917092 Arabidopsis thaliana
AT2G38040 10.0kb downstream 10.0kb downstream 14078 true Chr2: 15917093-15931170 Arabidopsis thaliana
AT2G38040 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15921171-15931170 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371154 5261 Brassicaceae View MSA
123830814 5264 Brassicales-Malvales View MSA
124338101 5266 SBM View MSA
124242928 5268 Malvidae View MSA
124065453 5270 Rosid View MSA
123737036 5271 Pentapetalae View MSA
122792152 5272 Eudicot View MSA
122047100 5273 Angiosperm View MSA
121351185 5274 Embryophyte View MSA
123426636 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.896     High  
cufflinks 34.134     High  
cufflinks 42.235     High High
cufflinks 27.29       Low
cufflinks 37.501     High  
cufflinks 36.07     High  

0 Strain