Gene : AT2G30650 A. thaliana TAIR10

Defline:  (1 of 3) PTHR11941//PTHR11941:SF81 - ENOYL-COA HYDRATASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2357
Name:  ? AT2G30650 Secondary Identifier:  ? PAC:19640786

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7574 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30650 0.5kb upstream 0.5kb upstream 3104 true Chr2: 13053777-13056880 Arabidopsis thaliana
AT2G30650 0.5kb upstream 0.5kb upstream 500 false Chr2: 13056381-13056880 Arabidopsis thaliana
AT2G30650 0.5kb downstream 0.5kb downstream 3104 true Chr2: 13053277-13056380 Arabidopsis thaliana
AT2G30650 0.5kb downstream 0.5kb downstream 500 false Chr2: 13053277-13053776 Arabidopsis thaliana
AT2G30650 1.0kb upstream 1.0kb upstream 3604 true Chr2: 13053777-13057380 Arabidopsis thaliana
AT2G30650 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13056381-13057380 Arabidopsis thaliana
AT2G30650 1.0kb downstream 1.0kb downstream 3604 true Chr2: 13052777-13056380 Arabidopsis thaliana
AT2G30650 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13052777-13053776 Arabidopsis thaliana
AT2G30650 2.0kb upstream 2.0kb upstream 4604 true Chr2: 13053777-13058380 Arabidopsis thaliana
AT2G30650 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13056381-13058380 Arabidopsis thaliana
AT2G30650 2.0kb downstream 2.0kb downstream 4604 true Chr2: 13051777-13056380 Arabidopsis thaliana
AT2G30650 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13051777-13053776 Arabidopsis thaliana
AT2G30650 5.0kb upstream 5.0kb upstream 7604 true Chr2: 13053777-13061380 Arabidopsis thaliana
AT2G30650 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13056381-13061380 Arabidopsis thaliana
AT2G30650 5.0kb downstream 5.0kb downstream 7604 true Chr2: 13048777-13056380 Arabidopsis thaliana
AT2G30650 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13048777-13053776 Arabidopsis thaliana
AT2G30650 10.0kb upstream 10.0kb upstream 12604 true Chr2: 13053777-13066380 Arabidopsis thaliana
AT2G30650 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13056381-13066380 Arabidopsis thaliana
AT2G30650 10.0kb downstream 10.0kb downstream 12604 true Chr2: 13043777-13056380 Arabidopsis thaliana
AT2G30650 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13043777-13053776 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381245 5261 Brassicaceae View MSA
123838723 5264 Brassicales-Malvales View MSA
124343848 5266 SBM View MSA
124242681 5268 Malvidae View MSA
124073878 5270 Rosid View MSA
123743362 5271 Pentapetalae View MSA
122792177 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low  
cufflinks 0.006     Low Low
cufflinks 0.048     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.007     Low  

0 Strain