Gene : AT2G41000 A. thaliana TAIR10
Defline:  (1 of 97) PF00226 - DnaJ domain (DnaJ) Genomic Order:  3492
Name:  ? AT2G41000 Secondary Identifier:  ? PAC:19643452
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41000 0.5kb upstream 0.5kb upstream 2692 true Chr2: 17110945-17113636 Arabidopsis thaliana
AT2G41000 0.5kb upstream 0.5kb upstream 500 false Chr2: 17110945-17111444 Arabidopsis thaliana
AT2G41000 0.5kb downstream 0.5kb downstream 2692 true Chr2: 17111445-17114136 Arabidopsis thaliana
AT2G41000 0.5kb downstream 0.5kb downstream 500 false Chr2: 17113637-17114136 Arabidopsis thaliana
AT2G41000 1.0kb upstream 1.0kb upstream 3192 true Chr2: 17110445-17113636 Arabidopsis thaliana
AT2G41000 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17110445-17111444 Arabidopsis thaliana
AT2G41000 1.0kb downstream 1.0kb downstream 3192 true Chr2: 17111445-17114636 Arabidopsis thaliana
AT2G41000 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17113637-17114636 Arabidopsis thaliana
AT2G41000 2.0kb upstream 2.0kb upstream 4192 true Chr2: 17109445-17113636 Arabidopsis thaliana
AT2G41000 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17109445-17111444 Arabidopsis thaliana
AT2G41000 2.0kb downstream 2.0kb downstream 4192 true Chr2: 17111445-17115636 Arabidopsis thaliana
AT2G41000 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17113637-17115636 Arabidopsis thaliana
AT2G41000 5.0kb upstream 5.0kb upstream 7192 true Chr2: 17106445-17113636 Arabidopsis thaliana
AT2G41000 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17106445-17111444 Arabidopsis thaliana
AT2G41000 5.0kb downstream 5.0kb downstream 7192 true Chr2: 17111445-17118636 Arabidopsis thaliana
AT2G41000 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17113637-17118636 Arabidopsis thaliana
AT2G41000 10.0kb upstream 10.0kb upstream 12192 true Chr2: 17101445-17113636 Arabidopsis thaliana
AT2G41000 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17101445-17111444 Arabidopsis thaliana
AT2G41000 10.0kb downstream 10.0kb downstream 12192 true Chr2: 17111445-17123636 Arabidopsis thaliana
AT2G41000 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17113637-17123636 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329639 5261 Brassicaceae Singleton cluster - no MSA
123836987 5264 Brassicales-Malvales View MSA
124339018 5266 SBM View MSA
124240280 5268 Malvidae View MSA
124063698 5270 Rosid View MSA
123739082 5271 Pentapetalae View MSA
122785668 5272 Eudicot View MSA
122047261 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121351379 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.224        
cufflinks 1.788       High
cufflinks 1.114        
cufflinks 1.46        
cufflinks 1.487        
cufflinks 1.038       Low

0 Strain