Gene : NLP1 A. thaliana TAIR10
Primary Identifier:  ? AT2G27450 Defline:  (1 of 1) 3.5.1.53 - N-carbamoylputrescine amidase
Genomic Order:  2032 Name:  ? AT2G27450
Secondary Identifier:  ? PAC:19643269
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-43 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27450 0.5kb upstream 0.5kb upstream 2759 true Chr2: 11737432-11740190 Arabidopsis thaliana
AT2G27450 0.5kb upstream 0.5kb upstream 500 false Chr2: 11739691-11740190 Arabidopsis thaliana
AT2G27450 0.5kb downstream 0.5kb downstream 2759 true Chr2: 11736932-11739690 Arabidopsis thaliana
AT2G27450 0.5kb downstream 0.5kb downstream 500 false Chr2: 11736932-11737431 Arabidopsis thaliana
AT2G27450 1.0kb upstream 1.0kb upstream 3259 true Chr2: 11737432-11740690 Arabidopsis thaliana
AT2G27450 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11739691-11740690 Arabidopsis thaliana
AT2G27450 1.0kb downstream 1.0kb downstream 3259 true Chr2: 11736432-11739690 Arabidopsis thaliana
AT2G27450 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11736432-11737431 Arabidopsis thaliana
AT2G27450 2.0kb upstream 2.0kb upstream 4259 true Chr2: 11737432-11741690 Arabidopsis thaliana
AT2G27450 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11739691-11741690 Arabidopsis thaliana
AT2G27450 2.0kb downstream 2.0kb downstream 4259 true Chr2: 11735432-11739690 Arabidopsis thaliana
AT2G27450 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11735432-11737431 Arabidopsis thaliana
AT2G27450 5.0kb upstream 5.0kb upstream 7259 true Chr2: 11737432-11744690 Arabidopsis thaliana
AT2G27450 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11739691-11744690 Arabidopsis thaliana
AT2G27450 5.0kb downstream 5.0kb downstream 7259 true Chr2: 11732432-11739690 Arabidopsis thaliana
AT2G27450 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11732432-11737431 Arabidopsis thaliana
AT2G27450 10.0kb upstream 10.0kb upstream 12259 true Chr2: 11737432-11749690 Arabidopsis thaliana
AT2G27450 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11739691-11749690 Arabidopsis thaliana
AT2G27450 10.0kb downstream 10.0kb downstream 12259 true Chr2: 11727432-11739690 Arabidopsis thaliana
AT2G27450 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11727432-11737431 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372754 5261 Brassicaceae View MSA
123838121 5264 Brassicales-Malvales View MSA
124345212 5266 SBM View MSA
124242710 5268 Malvidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.299        
cufflinks 9.172       High
cufflinks 7.52        
cufflinks 8.705        
cufflinks 8.025        
cufflinks 7.294       Low

0 Strain