Gene : AT2G27280 A. thaliana TAIR10
Defline:  (1 of 3) K13206 - coiled-coil domain-containing protein 55 (CCDC55) Genomic Order:  2012
Name:  ? AT2G27280 Secondary Identifier:  ? PAC:19640570
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27280 0.5kb upstream 0.5kb upstream 2288 true Chr2: 11673826-11676113 Arabidopsis thaliana
AT2G27280 0.5kb upstream 0.5kb upstream 500 false Chr2: 11675614-11676113 Arabidopsis thaliana
AT2G27280 0.5kb downstream 0.5kb downstream 2288 true Chr2: 11673326-11675613 Arabidopsis thaliana
AT2G27280 0.5kb downstream 0.5kb downstream 500 false Chr2: 11673326-11673825 Arabidopsis thaliana
AT2G27280 1.0kb upstream 1.0kb upstream 2788 true Chr2: 11673826-11676613 Arabidopsis thaliana
AT2G27280 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11675614-11676613 Arabidopsis thaliana
AT2G27280 1.0kb downstream 1.0kb downstream 2788 true Chr2: 11672826-11675613 Arabidopsis thaliana
AT2G27280 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11672826-11673825 Arabidopsis thaliana
AT2G27280 2.0kb upstream 2.0kb upstream 3788 true Chr2: 11673826-11677613 Arabidopsis thaliana
AT2G27280 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11675614-11677613 Arabidopsis thaliana
AT2G27280 2.0kb downstream 2.0kb downstream 3788 true Chr2: 11671826-11675613 Arabidopsis thaliana
AT2G27280 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11671826-11673825 Arabidopsis thaliana
AT2G27280 5.0kb upstream 5.0kb upstream 6788 true Chr2: 11673826-11680613 Arabidopsis thaliana
AT2G27280 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11675614-11680613 Arabidopsis thaliana
AT2G27280 5.0kb downstream 5.0kb downstream 6788 true Chr2: 11668826-11675613 Arabidopsis thaliana
AT2G27280 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11668826-11673825 Arabidopsis thaliana
AT2G27280 10.0kb upstream 10.0kb upstream 11788 true Chr2: 11673826-11685613 Arabidopsis thaliana
AT2G27280 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11675614-11685613 Arabidopsis thaliana
AT2G27280 10.0kb downstream 10.0kb downstream 11788 true Chr2: 11663826-11675613 Arabidopsis thaliana
AT2G27280 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11663826-11673825 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502916 5273 Angiosperm View MSA
122343925 5261 Brassicaceae View MSA
123784007 5264 Brassicales-Malvales View MSA
124282209 5266 SBM View MSA
124136849 5268 Malvidae View MSA
123864643 5270 Rosid View MSA
123449937 5271 Pentapetalae View MSA
122485464 5272 Eudicot View MSA
120776212 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.049     Low  
cufflinks 0.136     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.152     Low  
cufflinks 0.039     Low Low
cufflinks 0.113     Low  

0 Strain