Gene : AT2G39900 A. thaliana TAIR10
Defline:  (1 of 3) K09377 - cysteine and glycine-rich protein (CSRP) Genomic Order:  3363
Name:  ? AT2G39900 Secondary Identifier:  ? PAC:19641430
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39900 0.5kb upstream 0.5kb upstream 2282 true Chr2: 16658156-16660437 Arabidopsis thaliana
AT2G39900 0.5kb upstream 0.5kb upstream 500 false Chr2: 16658156-16658655 Arabidopsis thaliana
AT2G39900 0.5kb downstream 0.5kb downstream 2282 true Chr2: 16658656-16660937 Arabidopsis thaliana
AT2G39900 0.5kb downstream 0.5kb downstream 500 false Chr2: 16660438-16660937 Arabidopsis thaliana
AT2G39900 1.0kb upstream 1.0kb upstream 2782 true Chr2: 16657656-16660437 Arabidopsis thaliana
AT2G39900 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16657656-16658655 Arabidopsis thaliana
AT2G39900 1.0kb downstream 1.0kb downstream 2782 true Chr2: 16658656-16661437 Arabidopsis thaliana
AT2G39900 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16660438-16661437 Arabidopsis thaliana
AT2G39900 2.0kb upstream 2.0kb upstream 3782 true Chr2: 16656656-16660437 Arabidopsis thaliana
AT2G39900 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16656656-16658655 Arabidopsis thaliana
AT2G39900 2.0kb downstream 2.0kb downstream 3782 true Chr2: 16658656-16662437 Arabidopsis thaliana
AT2G39900 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16660438-16662437 Arabidopsis thaliana
AT2G39900 5.0kb upstream 5.0kb upstream 6782 true Chr2: 16653656-16660437 Arabidopsis thaliana
AT2G39900 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16653656-16658655 Arabidopsis thaliana
AT2G39900 5.0kb downstream 5.0kb downstream 6782 true Chr2: 16658656-16665437 Arabidopsis thaliana
AT2G39900 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16660438-16665437 Arabidopsis thaliana
AT2G39900 10.0kb upstream 10.0kb upstream 11782 true Chr2: 16648656-16660437 Arabidopsis thaliana
AT2G39900 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16648656-16658655 Arabidopsis thaliana
AT2G39900 10.0kb downstream 10.0kb downstream 11782 true Chr2: 16658656-16670437 Arabidopsis thaliana
AT2G39900 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16660438-16670437 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362254 5261 Brassicaceae View MSA
123836674 5264 Brassicales-Malvales View MSA
124350047 5266 SBM View MSA
124247965 5268 Malvidae View MSA
124066533 5270 Rosid View MSA
123751288 5271 Pentapetalae View MSA
122792830 5272 Eudicot View MSA
122045470 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.284        
cufflinks 66.389     High  
cufflinks 18.842        
cufflinks 57.599     High  
cufflinks 16.16       Low
cufflinks 76.813     High High

0 Strain