Gene : MTP11 A. thaliana TAIR10
Primary Identifier:  ? AT2G39450 Defline:  (1 of 1) PTHR11562//PTHR11562:SF33 - CATION EFFLUX PROTEIN/ ZINC TRANSPORTER // METAL TOLERANCE PROTEIN 11
Genomic Order:  3313 Name:  ? AT2G39450
Secondary Identifier:  ? PAC:19642727
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39450 0.5kb upstream 0.5kb upstream 2687 true Chr2: 16471632-16474318 Arabidopsis thaliana
AT2G39450 0.5kb upstream 0.5kb upstream 500 false Chr2: 16473819-16474318 Arabidopsis thaliana
AT2G39450 0.5kb downstream 0.5kb downstream 2687 true Chr2: 16471132-16473818 Arabidopsis thaliana
AT2G39450 0.5kb downstream 0.5kb downstream 500 false Chr2: 16471132-16471631 Arabidopsis thaliana
AT2G39450 1.0kb upstream 1.0kb upstream 3187 true Chr2: 16471632-16474818 Arabidopsis thaliana
AT2G39450 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16473819-16474818 Arabidopsis thaliana
AT2G39450 1.0kb downstream 1.0kb downstream 3187 true Chr2: 16470632-16473818 Arabidopsis thaliana
AT2G39450 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16470632-16471631 Arabidopsis thaliana
AT2G39450 2.0kb upstream 2.0kb upstream 4187 true Chr2: 16471632-16475818 Arabidopsis thaliana
AT2G39450 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16473819-16475818 Arabidopsis thaliana
AT2G39450 2.0kb downstream 2.0kb downstream 4187 true Chr2: 16469632-16473818 Arabidopsis thaliana
AT2G39450 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16469632-16471631 Arabidopsis thaliana
AT2G39450 5.0kb upstream 5.0kb upstream 7187 true Chr2: 16471632-16478818 Arabidopsis thaliana
AT2G39450 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16473819-16478818 Arabidopsis thaliana
AT2G39450 5.0kb downstream 5.0kb downstream 7187 true Chr2: 16466632-16473818 Arabidopsis thaliana
AT2G39450 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16466632-16471631 Arabidopsis thaliana
AT2G39450 10.0kb upstream 10.0kb upstream 12187 true Chr2: 16471632-16483818 Arabidopsis thaliana
AT2G39450 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16473819-16483818 Arabidopsis thaliana
AT2G39450 10.0kb downstream 10.0kb downstream 12187 true Chr2: 16461632-16473818 Arabidopsis thaliana
AT2G39450 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16461632-16471631 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360928 5261 Brassicaceae View MSA
123831824 5264 Brassicales-Malvales View MSA
124338273 5266 SBM View MSA
124238342 5268 Malvidae View MSA
124064943 5270 Rosid View MSA
123746602 5271 Pentapetalae View MSA
122792953 5272 Eudicot View MSA
122045121 5273 Angiosperm View MSA
121345008 5274 Embryophyte View MSA
123428793 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.543       Low
cufflinks 25.205        
cufflinks 14.42        
cufflinks 27.585        
cufflinks 26.582     High  
cufflinks 23.089        

0 Strain