Gene : AT2G17670 A. thaliana TAIR10
Defline:  (1 of 423) PF13041 - PPR repeat family (PPR_2) Genomic Order:  995
Name:  ? AT2G17670 Secondary Identifier:  ? PAC:19641065
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17670 0.5kb upstream 0.5kb upstream 2307 true Chr2: 7673851-7676157 Arabidopsis thaliana
AT2G17670 0.5kb upstream 0.5kb upstream 500 false Chr2: 7673851-7674350 Arabidopsis thaliana
AT2G17670 0.5kb downstream 0.5kb downstream 2307 true Chr2: 7674351-7676657 Arabidopsis thaliana
AT2G17670 0.5kb downstream 0.5kb downstream 500 false Chr2: 7676158-7676657 Arabidopsis thaliana
AT2G17670 1.0kb upstream 1.0kb upstream 2807 true Chr2: 7673351-7676157 Arabidopsis thaliana
AT2G17670 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7673351-7674350 Arabidopsis thaliana
AT2G17670 1.0kb downstream 1.0kb downstream 2807 true Chr2: 7674351-7677157 Arabidopsis thaliana
AT2G17670 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7676158-7677157 Arabidopsis thaliana
AT2G17670 2.0kb upstream 2.0kb upstream 3807 true Chr2: 7672351-7676157 Arabidopsis thaliana
AT2G17670 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7672351-7674350 Arabidopsis thaliana
AT2G17670 2.0kb downstream 2.0kb downstream 3807 true Chr2: 7674351-7678157 Arabidopsis thaliana
AT2G17670 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7676158-7678157 Arabidopsis thaliana
AT2G17670 5.0kb upstream 5.0kb upstream 6807 true Chr2: 7669351-7676157 Arabidopsis thaliana
AT2G17670 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7669351-7674350 Arabidopsis thaliana
AT2G17670 5.0kb downstream 5.0kb downstream 6807 true Chr2: 7674351-7681157 Arabidopsis thaliana
AT2G17670 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7676158-7681157 Arabidopsis thaliana
AT2G17670 10.0kb upstream 10.0kb upstream 11807 true Chr2: 7664351-7676157 Arabidopsis thaliana
AT2G17670 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7664351-7674350 Arabidopsis thaliana
AT2G17670 10.0kb downstream 10.0kb downstream 11807 true Chr2: 7674351-7686157 Arabidopsis thaliana
AT2G17670 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7676158-7686157 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362809 5261 Brassicaceae View MSA
123831532 5264 Brassicales-Malvales View MSA
124344404 5266 SBM View MSA
124239282 5268 Malvidae View MSA
124050377 5270 Rosid View MSA
123739053 5271 Pentapetalae View MSA
122787192 5272 Eudicot View MSA
122046913 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.163        
cufflinks 3.046        
cufflinks 2.224        
cufflinks 2.921        
cufflinks 1.933       Low
cufflinks 3.069        

0 Strain