Gene : AT2G17340 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  963
Name:  ? AT2G17340 Secondary Identifier:  ? PAC:19640448
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17340 0.5kb upstream 0.5kb upstream 3223 true Chr2: 7541406-7544628 Arabidopsis thaliana
AT2G17340 0.5kb upstream 0.5kb upstream 500 false Chr2: 7544129-7544628 Arabidopsis thaliana
AT2G17340 0.5kb downstream 0.5kb downstream 3223 true Chr2: 7540906-7544128 Arabidopsis thaliana
AT2G17340 0.5kb downstream 0.5kb downstream 500 false Chr2: 7540906-7541405 Arabidopsis thaliana
AT2G17340 1.0kb upstream 1.0kb upstream 3723 true Chr2: 7541406-7545128 Arabidopsis thaliana
AT2G17340 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7544129-7545128 Arabidopsis thaliana
AT2G17340 1.0kb downstream 1.0kb downstream 3723 true Chr2: 7540406-7544128 Arabidopsis thaliana
AT2G17340 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7540406-7541405 Arabidopsis thaliana
AT2G17340 2.0kb upstream 2.0kb upstream 4723 true Chr2: 7541406-7546128 Arabidopsis thaliana
AT2G17340 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7544129-7546128 Arabidopsis thaliana
AT2G17340 2.0kb downstream 2.0kb downstream 4723 true Chr2: 7539406-7544128 Arabidopsis thaliana
AT2G17340 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7539406-7541405 Arabidopsis thaliana
AT2G17340 5.0kb upstream 5.0kb upstream 7723 true Chr2: 7541406-7549128 Arabidopsis thaliana
AT2G17340 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7544129-7549128 Arabidopsis thaliana
AT2G17340 5.0kb downstream 5.0kb downstream 7723 true Chr2: 7536406-7544128 Arabidopsis thaliana
AT2G17340 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7536406-7541405 Arabidopsis thaliana
AT2G17340 10.0kb upstream 10.0kb upstream 12723 true Chr2: 7541406-7554128 Arabidopsis thaliana
AT2G17340 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7544129-7554128 Arabidopsis thaliana
AT2G17340 10.0kb downstream 10.0kb downstream 12723 true Chr2: 7531406-7544128 Arabidopsis thaliana
AT2G17340 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7531406-7541405 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343725 5261 Brassicaceae View MSA
123841201 5264 Brassicales-Malvales View MSA
124344397 5266 SBM View MSA
124236880 5268 Malvidae View MSA
124060994 5270 Rosid View MSA
123736699 5271 Pentapetalae View MSA
122786130 5272 Eudicot View MSA
122042661 5273 Angiosperm View MSA
121343944 5274 Embryophyte View MSA
123428038 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.547       High
cufflinks 13.42        
cufflinks 19.36        
cufflinks 13.169        
cufflinks 17.037        
cufflinks 13.13        

0 Strain