Gene : PAP7 A. thaliana TAIR10
Primary Identifier:  ? AT2G01880 Defline:  (1 of 5) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
Genomic Order:  89 Name:  ? AT2G01880
Secondary Identifier:  ? PAC:19639828
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5083 Arabidopsis thaliana pathologic  
Athaliana PWY-6348 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01880 0.5kb upstream 0.5kb upstream 3110 true Chr2: 391423-394532 Arabidopsis thaliana
AT2G01880 0.5kb upstream 0.5kb upstream 500 false Chr2: 394033-394532 Arabidopsis thaliana
AT2G01880 0.5kb downstream 0.5kb downstream 3110 true Chr2: 390923-394032 Arabidopsis thaliana
AT2G01880 0.5kb downstream 0.5kb downstream 500 false Chr2: 390923-391422 Arabidopsis thaliana
AT2G01880 1.0kb upstream 1.0kb upstream 3610 true Chr2: 391423-395032 Arabidopsis thaliana
AT2G01880 1.0kb upstream 1.0kb upstream 1000 false Chr2: 394033-395032 Arabidopsis thaliana
AT2G01880 1.0kb downstream 1.0kb downstream 3610 true Chr2: 390423-394032 Arabidopsis thaliana
AT2G01880 1.0kb downstream 1.0kb downstream 1000 false Chr2: 390423-391422 Arabidopsis thaliana
AT2G01880 2.0kb upstream 2.0kb upstream 4610 true Chr2: 391423-396032 Arabidopsis thaliana
AT2G01880 2.0kb upstream 2.0kb upstream 2000 false Chr2: 394033-396032 Arabidopsis thaliana
AT2G01880 2.0kb downstream 2.0kb downstream 4610 true Chr2: 389423-394032 Arabidopsis thaliana
AT2G01880 2.0kb downstream 2.0kb downstream 2000 false Chr2: 389423-391422 Arabidopsis thaliana
AT2G01880 5.0kb upstream 5.0kb upstream 7610 true Chr2: 391423-399032 Arabidopsis thaliana
AT2G01880 5.0kb upstream 5.0kb upstream 5000 false Chr2: 394033-399032 Arabidopsis thaliana
AT2G01880 5.0kb downstream 5.0kb downstream 7610 true Chr2: 386423-394032 Arabidopsis thaliana
AT2G01880 5.0kb downstream 5.0kb downstream 5000 false Chr2: 386423-391422 Arabidopsis thaliana
AT2G01880 10.0kb upstream 10.0kb upstream 12610 true Chr2: 391423-404032 Arabidopsis thaliana
AT2G01880 10.0kb upstream 10.0kb upstream 10000 false Chr2: 394033-404032 Arabidopsis thaliana
AT2G01880 10.0kb downstream 10.0kb downstream 12610 true Chr2: 381423-394032 Arabidopsis thaliana
AT2G01880 10.0kb downstream 10.0kb downstream 10000 false Chr2: 381423-391422 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372081 5261 Brassicaceae View MSA
123800289 5264 Brassicales-Malvales View MSA
124344138 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low  
cufflinks 2.174        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.999        
cufflinks 0.006     Low Low
cufflinks 6.5        

0 Strain