Gene : AT2G25830 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED Genomic Order:  1861
Name:  ? AT2G25830 Secondary Identifier:  ? PAC:19639402
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G25830 0.5kb upstream 0.5kb upstream 3484 true Chr2: 11018716-11022199 Arabidopsis thaliana
AT2G25830 0.5kb upstream 0.5kb upstream 500 false Chr2: 11021700-11022199 Arabidopsis thaliana
AT2G25830 0.5kb downstream 0.5kb downstream 3484 true Chr2: 11018216-11021699 Arabidopsis thaliana
AT2G25830 0.5kb downstream 0.5kb downstream 500 false Chr2: 11018216-11018715 Arabidopsis thaliana
AT2G25830 1.0kb upstream 1.0kb upstream 3984 true Chr2: 11018716-11022699 Arabidopsis thaliana
AT2G25830 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11021700-11022699 Arabidopsis thaliana
AT2G25830 1.0kb downstream 1.0kb downstream 3984 true Chr2: 11017716-11021699 Arabidopsis thaliana
AT2G25830 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11017716-11018715 Arabidopsis thaliana
AT2G25830 2.0kb upstream 2.0kb upstream 4984 true Chr2: 11018716-11023699 Arabidopsis thaliana
AT2G25830 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11021700-11023699 Arabidopsis thaliana
AT2G25830 2.0kb downstream 2.0kb downstream 4984 true Chr2: 11016716-11021699 Arabidopsis thaliana
AT2G25830 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11016716-11018715 Arabidopsis thaliana
AT2G25830 5.0kb upstream 5.0kb upstream 7984 true Chr2: 11018716-11026699 Arabidopsis thaliana
AT2G25830 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11021700-11026699 Arabidopsis thaliana
AT2G25830 5.0kb downstream 5.0kb downstream 7984 true Chr2: 11013716-11021699 Arabidopsis thaliana
AT2G25830 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11013716-11018715 Arabidopsis thaliana
AT2G25830 10.0kb upstream 10.0kb upstream 12984 true Chr2: 11018716-11031699 Arabidopsis thaliana
AT2G25830 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11021700-11031699 Arabidopsis thaliana
AT2G25830 10.0kb downstream 10.0kb downstream 12984 true Chr2: 11008716-11021699 Arabidopsis thaliana
AT2G25830 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11008716-11018715 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368422 5261 Brassicaceae View MSA
123833652 5264 Brassicales-Malvales View MSA
124338879 5266 SBM View MSA
124238175 5268 Malvidae View MSA
124060394 5270 Rosid View MSA
123737611 5271 Pentapetalae View MSA
122791742 5272 Eudicot View MSA
122042716 5273 Angiosperm View MSA
121345418 5274 Embryophyte View MSA
123424346 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.847       High
cufflinks 4.411        
cufflinks 18.095       High
cufflinks 3.913        
cufflinks 12.962        
cufflinks 4.0        

0 Strain