Gene : AT2G21990 A. thaliana TAIR10
Defline:  (1 of 12) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  1457
Name:  ? AT2G21990 Secondary Identifier:  ? PAC:19642738
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G21990 0.5kb upstream 0.5kb upstream 1809 true Chr2: 9359356-9361164 Arabidopsis thaliana
AT2G21990 0.5kb upstream 0.5kb upstream 500 false Chr2: 9360665-9361164 Arabidopsis thaliana
AT2G21990 0.5kb downstream 0.5kb downstream 1809 true Chr2: 9358856-9360664 Arabidopsis thaliana
AT2G21990 0.5kb downstream 0.5kb downstream 500 false Chr2: 9358856-9359355 Arabidopsis thaliana
AT2G21990 1.0kb upstream 1.0kb upstream 2309 true Chr2: 9359356-9361664 Arabidopsis thaliana
AT2G21990 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9360665-9361664 Arabidopsis thaliana
AT2G21990 1.0kb downstream 1.0kb downstream 2309 true Chr2: 9358356-9360664 Arabidopsis thaliana
AT2G21990 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9358356-9359355 Arabidopsis thaliana
AT2G21990 2.0kb upstream 2.0kb upstream 3309 true Chr2: 9359356-9362664 Arabidopsis thaliana
AT2G21990 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9360665-9362664 Arabidopsis thaliana
AT2G21990 2.0kb downstream 2.0kb downstream 3309 true Chr2: 9357356-9360664 Arabidopsis thaliana
AT2G21990 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9357356-9359355 Arabidopsis thaliana
AT2G21990 5.0kb upstream 5.0kb upstream 6309 true Chr2: 9359356-9365664 Arabidopsis thaliana
AT2G21990 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9360665-9365664 Arabidopsis thaliana
AT2G21990 5.0kb downstream 5.0kb downstream 6309 true Chr2: 9354356-9360664 Arabidopsis thaliana
AT2G21990 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9354356-9359355 Arabidopsis thaliana
AT2G21990 10.0kb upstream 10.0kb upstream 11309 true Chr2: 9359356-9370664 Arabidopsis thaliana
AT2G21990 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9360665-9370664 Arabidopsis thaliana
AT2G21990 10.0kb downstream 10.0kb downstream 11309 true Chr2: 9349356-9360664 Arabidopsis thaliana
AT2G21990 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9349356-9359355 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366652 5261 Brassicaceae View MSA
123837293 5264 Brassicales-Malvales View MSA
124338848 5266 SBM View MSA
124237368 5268 Malvidae View MSA
124073904 5270 Rosid View MSA
123746420 5271 Pentapetalae View MSA
122793418 5272 Eudicot View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.053     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.082     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.092     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain