Gene : AT2G18340 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23241//PTHR23241:SF54 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED // LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-RELATED Genomic Order:  1072
Name:  ? AT2G18340 Secondary Identifier:  ? PAC:19639273
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18340 0.5kb upstream 0.5kb upstream 2295 true Chr2: 7968820-7971114 Arabidopsis thaliana
AT2G18340 0.5kb upstream 0.5kb upstream 500 false Chr2: 7968820-7969319 Arabidopsis thaliana
AT2G18340 0.5kb downstream 0.5kb downstream 2295 true Chr2: 7969320-7971614 Arabidopsis thaliana
AT2G18340 0.5kb downstream 0.5kb downstream 500 false Chr2: 7971115-7971614 Arabidopsis thaliana
AT2G18340 1.0kb upstream 1.0kb upstream 2795 true Chr2: 7968320-7971114 Arabidopsis thaliana
AT2G18340 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7968320-7969319 Arabidopsis thaliana
AT2G18340 1.0kb downstream 1.0kb downstream 2795 true Chr2: 7969320-7972114 Arabidopsis thaliana
AT2G18340 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7971115-7972114 Arabidopsis thaliana
AT2G18340 2.0kb upstream 2.0kb upstream 3795 true Chr2: 7967320-7971114 Arabidopsis thaliana
AT2G18340 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7967320-7969319 Arabidopsis thaliana
AT2G18340 2.0kb downstream 2.0kb downstream 3795 true Chr2: 7969320-7973114 Arabidopsis thaliana
AT2G18340 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7971115-7973114 Arabidopsis thaliana
AT2G18340 5.0kb upstream 5.0kb upstream 6795 true Chr2: 7964320-7971114 Arabidopsis thaliana
AT2G18340 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7964320-7969319 Arabidopsis thaliana
AT2G18340 5.0kb downstream 5.0kb downstream 6795 true Chr2: 7969320-7976114 Arabidopsis thaliana
AT2G18340 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7971115-7976114 Arabidopsis thaliana
AT2G18340 10.0kb upstream 10.0kb upstream 11795 true Chr2: 7959320-7971114 Arabidopsis thaliana
AT2G18340 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7959320-7969319 Arabidopsis thaliana
AT2G18340 10.0kb downstream 10.0kb downstream 11795 true Chr2: 7969320-7981114 Arabidopsis thaliana
AT2G18340 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7971115-7981114 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371396 5261 Brassicaceae View MSA
123800159 5264 Brassicales-Malvales View MSA
124297605 5266 SBM View MSA
124248034 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.022     Low  
cufflinks 0.004     Low Low
cufflinks 0.03     Low  
cufflinks 0.018     Low  
cufflinks 0.054     Low High
cufflinks 0.039     Low  

0 Strain