Gene : AT2G46170 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10994:SF89 - RETICULON-LIKE PROTEIN B5-RELATED Genomic Order:  4034
Name:  ? AT2G46170 Secondary Identifier:  ? PAC:19641167
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46170 0.5kb upstream 0.5kb upstream 2401 true Chr2: 18964813-18967213 Arabidopsis thaliana
AT2G46170 0.5kb upstream 0.5kb upstream 500 false Chr2: 18964813-18965312 Arabidopsis thaliana
AT2G46170 0.5kb downstream 0.5kb downstream 2401 true Chr2: 18965313-18967713 Arabidopsis thaliana
AT2G46170 0.5kb downstream 0.5kb downstream 500 false Chr2: 18967214-18967713 Arabidopsis thaliana
AT2G46170 1.0kb upstream 1.0kb upstream 2901 true Chr2: 18964313-18967213 Arabidopsis thaliana
AT2G46170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18964313-18965312 Arabidopsis thaliana
AT2G46170 1.0kb downstream 1.0kb downstream 2901 true Chr2: 18965313-18968213 Arabidopsis thaliana
AT2G46170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18967214-18968213 Arabidopsis thaliana
AT2G46170 2.0kb upstream 2.0kb upstream 3901 true Chr2: 18963313-18967213 Arabidopsis thaliana
AT2G46170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18963313-18965312 Arabidopsis thaliana
AT2G46170 2.0kb downstream 2.0kb downstream 3901 true Chr2: 18965313-18969213 Arabidopsis thaliana
AT2G46170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18967214-18969213 Arabidopsis thaliana
AT2G46170 5.0kb upstream 5.0kb upstream 6901 true Chr2: 18960313-18967213 Arabidopsis thaliana
AT2G46170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18960313-18965312 Arabidopsis thaliana
AT2G46170 5.0kb downstream 5.0kb downstream 6901 true Chr2: 18965313-18972213 Arabidopsis thaliana
AT2G46170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18967214-18972213 Arabidopsis thaliana
AT2G46170 10.0kb upstream 10.0kb upstream 11901 true Chr2: 18955313-18967213 Arabidopsis thaliana
AT2G46170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18955313-18965312 Arabidopsis thaliana
AT2G46170 10.0kb downstream 10.0kb downstream 11901 true Chr2: 18965313-18977213 Arabidopsis thaliana
AT2G46170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18967214-18977213 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372708 5261 Brassicaceae View MSA
123827491 5264 Brassicales-Malvales View MSA
124343239 5266 SBM View MSA
124252411 5268 Malvidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.535        
cufflinks 11.517        
cufflinks 9.991       Low
cufflinks 13.849       High
cufflinks 10.584        
cufflinks 13.299        

0 Strain