Gene : AT2G44400 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13871//PTHR13871:SF46 - THIOREDOXIN // CYSTEINE/HISTIDINE-RICH C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  3854
Name:  ? AT2G44400 Secondary Identifier:  ? PAC:19643432
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44400 0.5kb upstream 0.5kb upstream 941 true Chr2: 18326596-18327536 Arabidopsis thaliana
AT2G44400 0.5kb upstream 0.5kb upstream 500 false Chr2: 18326596-18327095 Arabidopsis thaliana
AT2G44400 0.5kb downstream 0.5kb downstream 941 true Chr2: 18327096-18328036 Arabidopsis thaliana
AT2G44400 0.5kb downstream 0.5kb downstream 500 false Chr2: 18327537-18328036 Arabidopsis thaliana
AT2G44400 1.0kb upstream 1.0kb upstream 1441 true Chr2: 18326096-18327536 Arabidopsis thaliana
AT2G44400 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18326096-18327095 Arabidopsis thaliana
AT2G44400 1.0kb downstream 1.0kb downstream 1441 true Chr2: 18327096-18328536 Arabidopsis thaliana
AT2G44400 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18327537-18328536 Arabidopsis thaliana
AT2G44400 2.0kb upstream 2.0kb upstream 2441 true Chr2: 18325096-18327536 Arabidopsis thaliana
AT2G44400 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18325096-18327095 Arabidopsis thaliana
AT2G44400 2.0kb downstream 2.0kb downstream 2441 true Chr2: 18327096-18329536 Arabidopsis thaliana
AT2G44400 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18327537-18329536 Arabidopsis thaliana
AT2G44400 5.0kb upstream 5.0kb upstream 5441 true Chr2: 18322096-18327536 Arabidopsis thaliana
AT2G44400 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18322096-18327095 Arabidopsis thaliana
AT2G44400 5.0kb downstream 5.0kb downstream 5441 true Chr2: 18327096-18332536 Arabidopsis thaliana
AT2G44400 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18327537-18332536 Arabidopsis thaliana
AT2G44400 10.0kb upstream 10.0kb upstream 10441 true Chr2: 18317096-18327536 Arabidopsis thaliana
AT2G44400 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18317096-18327095 Arabidopsis thaliana
AT2G44400 10.0kb downstream 10.0kb downstream 10441 true Chr2: 18327096-18337536 Arabidopsis thaliana
AT2G44400 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18327537-18337536 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329636 5261 Brassicaceae Singleton cluster - no MSA
123770931 5264 Brassicales-Malvales Singleton cluster - no MSA
124269465 5266 SBM Singleton cluster - no MSA
124125603 5268 Malvidae Singleton cluster - no MSA
124074653 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.386       High
cufflinks 0.136     Low  
cufflinks 0.163     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.349        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain