Sequence Feature Displayer
Ontology Annotation Displayer
2 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-5885 | Arabidopsis thaliana | pathologic | |
Athaliana TRIGLSYN-PWY | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT2G43255 0.5kb upstream | 0.5kb | upstream | 2107 | true | Chr2: 17979703-17981809 | Arabidopsis thaliana |
AT2G43255 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr2: 17981310-17981809 | Arabidopsis thaliana |
AT2G43255 0.5kb downstream | 0.5kb | downstream | 2107 | true | Chr2: 17979203-17981309 | Arabidopsis thaliana |
AT2G43255 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr2: 17979203-17979702 | Arabidopsis thaliana |
AT2G43255 1.0kb upstream | 1.0kb | upstream | 2607 | true | Chr2: 17979703-17982309 | Arabidopsis thaliana |
AT2G43255 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr2: 17981310-17982309 | Arabidopsis thaliana |
AT2G43255 1.0kb downstream | 1.0kb | downstream | 2607 | true | Chr2: 17978703-17981309 | Arabidopsis thaliana |
AT2G43255 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr2: 17978703-17979702 | Arabidopsis thaliana |
AT2G43255 2.0kb upstream | 2.0kb | upstream | 3607 | true | Chr2: 17979703-17983309 | Arabidopsis thaliana |
AT2G43255 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr2: 17981310-17983309 | Arabidopsis thaliana |
AT2G43255 2.0kb downstream | 2.0kb | downstream | 3607 | true | Chr2: 17977703-17981309 | Arabidopsis thaliana |
AT2G43255 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr2: 17977703-17979702 | Arabidopsis thaliana |
AT2G43255 5.0kb upstream | 5.0kb | upstream | 6607 | true | Chr2: 17979703-17986309 | Arabidopsis thaliana |
AT2G43255 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr2: 17981310-17986309 | Arabidopsis thaliana |
AT2G43255 5.0kb downstream | 5.0kb | downstream | 6607 | true | Chr2: 17974703-17981309 | Arabidopsis thaliana |
AT2G43255 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr2: 17974703-17979702 | Arabidopsis thaliana |
AT2G43255 10.0kb upstream | 10.0kb | upstream | 11607 | true | Chr2: 17979703-17991309 | Arabidopsis thaliana |
AT2G43255 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr2: 17981310-17991309 | Arabidopsis thaliana |
AT2G43255 10.0kb downstream | 10.0kb | downstream | 11607 | true | Chr2: 17969703-17981309 | Arabidopsis thaliana |
AT2G43255 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr2: 17969703-17979702 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122378149 | 5261 | Brassicaceae | View MSA |
123801760 | 5264 | Brassicales-Malvales | View MSA |
124346699 | 5266 | SBM | View MSA |
124250645 | 5268 | Malvidae | View MSA |
124071260 | 5270 | Rosid | View MSA |
123753157 | 5271 | Pentapetalae | View MSA |
122794837 | 5272 | Eudicot | View MSA |
122049272 | 5273 | Angiosperm | View MSA |
121311322 | 5274 | Embryophyte | View MSA |
123348632 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.014 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.024 | Low | High | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.01 | Low |