Gene : TBL39 A. thaliana TAIR10
Primary Identifier:  ? AT2G42570 Defline:  (1 of 2) PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED
Genomic Order:  3657 Name:  ? AT2G42570
Secondary Identifier:  ? PAC:19639537
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42570 0.5kb upstream 0.5kb upstream 3214 true Chr2: 17717367-17720580 Arabidopsis thaliana
AT2G42570 0.5kb upstream 0.5kb upstream 500 false Chr2: 17720081-17720580 Arabidopsis thaliana
AT2G42570 0.5kb downstream 0.5kb downstream 3214 true Chr2: 17716867-17720080 Arabidopsis thaliana
AT2G42570 0.5kb downstream 0.5kb downstream 500 false Chr2: 17716867-17717366 Arabidopsis thaliana
AT2G42570 1.0kb upstream 1.0kb upstream 3714 true Chr2: 17717367-17721080 Arabidopsis thaliana
AT2G42570 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17720081-17721080 Arabidopsis thaliana
AT2G42570 1.0kb downstream 1.0kb downstream 3714 true Chr2: 17716367-17720080 Arabidopsis thaliana
AT2G42570 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17716367-17717366 Arabidopsis thaliana
AT2G42570 2.0kb upstream 2.0kb upstream 4714 true Chr2: 17717367-17722080 Arabidopsis thaliana
AT2G42570 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17720081-17722080 Arabidopsis thaliana
AT2G42570 2.0kb downstream 2.0kb downstream 4714 true Chr2: 17715367-17720080 Arabidopsis thaliana
AT2G42570 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17715367-17717366 Arabidopsis thaliana
AT2G42570 5.0kb upstream 5.0kb upstream 7714 true Chr2: 17717367-17725080 Arabidopsis thaliana
AT2G42570 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17720081-17725080 Arabidopsis thaliana
AT2G42570 5.0kb downstream 5.0kb downstream 7714 true Chr2: 17712367-17720080 Arabidopsis thaliana
AT2G42570 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17712367-17717366 Arabidopsis thaliana
AT2G42570 10.0kb upstream 10.0kb upstream 12714 true Chr2: 17717367-17730080 Arabidopsis thaliana
AT2G42570 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17720081-17730080 Arabidopsis thaliana
AT2G42570 10.0kb downstream 10.0kb downstream 12714 true Chr2: 17707367-17720080 Arabidopsis thaliana
AT2G42570 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17707367-17717366 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375430 5261 Brassicaceae View MSA
123833870 5264 Brassicales-Malvales View MSA
124339562 5266 SBM View MSA
124239692 5268 Malvidae View MSA
124062840 5270 Rosid View MSA
123739280 5271 Pentapetalae View MSA
122797510 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.308        
cufflinks 59.23     High  
cufflinks 3.14        
cufflinks 49.061     High  
cufflinks 2.721       Low
cufflinks 59.537     High  

0 Strain