Gene : AT2G41170 A. thaliana TAIR10
Defline:  (1 of 518) PF00646 - F-box domain (F-box) Genomic Order:  3509
Name:  ? AT2G41170 Secondary Identifier:  ? PAC:19639389
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41170 0.5kb upstream 0.5kb upstream 2533 true Chr2: 17159104-17161636 Arabidopsis thaliana
AT2G41170 0.5kb upstream 0.5kb upstream 500 false Chr2: 17161137-17161636 Arabidopsis thaliana
AT2G41170 0.5kb downstream 0.5kb downstream 2533 true Chr2: 17158604-17161136 Arabidopsis thaliana
AT2G41170 0.5kb downstream 0.5kb downstream 500 false Chr2: 17158604-17159103 Arabidopsis thaliana
AT2G41170 1.0kb upstream 1.0kb upstream 3033 true Chr2: 17159104-17162136 Arabidopsis thaliana
AT2G41170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17161137-17162136 Arabidopsis thaliana
AT2G41170 1.0kb downstream 1.0kb downstream 3033 true Chr2: 17158104-17161136 Arabidopsis thaliana
AT2G41170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17158104-17159103 Arabidopsis thaliana
AT2G41170 2.0kb upstream 2.0kb upstream 4033 true Chr2: 17159104-17163136 Arabidopsis thaliana
AT2G41170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17161137-17163136 Arabidopsis thaliana
AT2G41170 2.0kb downstream 2.0kb downstream 4033 true Chr2: 17157104-17161136 Arabidopsis thaliana
AT2G41170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17157104-17159103 Arabidopsis thaliana
AT2G41170 5.0kb upstream 5.0kb upstream 7033 true Chr2: 17159104-17166136 Arabidopsis thaliana
AT2G41170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17161137-17166136 Arabidopsis thaliana
AT2G41170 5.0kb downstream 5.0kb downstream 7033 true Chr2: 17154104-17161136 Arabidopsis thaliana
AT2G41170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17154104-17159103 Arabidopsis thaliana
AT2G41170 10.0kb upstream 10.0kb upstream 12033 true Chr2: 17159104-17171136 Arabidopsis thaliana
AT2G41170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17161137-17171136 Arabidopsis thaliana
AT2G41170 10.0kb downstream 10.0kb downstream 12033 true Chr2: 17149104-17161136 Arabidopsis thaliana
AT2G41170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17149104-17159103 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368625 5261 Brassicaceae View MSA
123799624 5264 Brassicales-Malvales View MSA
124297126 5266 SBM View MSA
124251732 5268 Malvidae View MSA
124072585 5270 Rosid View MSA
123747687 5271 Pentapetalae View MSA
122796763 5272 Eudicot View MSA
122043439 5273 Angiosperm View MSA
121346744 5274 Embryophyte View MSA
123380437 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.867        
cufflinks 2.573        
cufflinks 1.302       Low
cufflinks 3.758        
cufflinks 1.523       Low
cufflinks 4.981       High

0 Strain