Gene : Bradi1g00567 B. distachyon v3.1
Defline:  (1 of 1) PTHR22847//PTHR22847:SF429 - WD40 REPEAT PROTEIN Genomic Order:  63
Name:  ? Bradi1g00567 Secondary Identifier:  ? PAC:32805505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g00567 0.5kb upstream 0.5kb upstream 7912 true Bd1: 453524-461435 Brachypodium distachyon
Bradi1g00567 0.5kb upstream 0.5kb upstream 500 false Bd1: 460936-461435 Brachypodium distachyon
Bradi1g00567 0.5kb downstream 0.5kb downstream 7912 true Bd1: 453024-460935 Brachypodium distachyon
Bradi1g00567 0.5kb downstream 0.5kb downstream 500 false Bd1: 453024-453523 Brachypodium distachyon
Bradi1g00567 1.0kb upstream 1.0kb upstream 8412 true Bd1: 453524-461935 Brachypodium distachyon
Bradi1g00567 1.0kb upstream 1.0kb upstream 1000 false Bd1: 460936-461935 Brachypodium distachyon
Bradi1g00567 1.0kb downstream 1.0kb downstream 8412 true Bd1: 452524-460935 Brachypodium distachyon
Bradi1g00567 1.0kb downstream 1.0kb downstream 1000 false Bd1: 452524-453523 Brachypodium distachyon
Bradi1g00567 2.0kb upstream 2.0kb upstream 9412 true Bd1: 453524-462935 Brachypodium distachyon
Bradi1g00567 2.0kb upstream 2.0kb upstream 2000 false Bd1: 460936-462935 Brachypodium distachyon
Bradi1g00567 2.0kb downstream 2.0kb downstream 9412 true Bd1: 451524-460935 Brachypodium distachyon
Bradi1g00567 2.0kb downstream 2.0kb downstream 2000 false Bd1: 451524-453523 Brachypodium distachyon
Bradi1g00567 5.0kb upstream 5.0kb upstream 12412 true Bd1: 453524-465935 Brachypodium distachyon
Bradi1g00567 5.0kb upstream 5.0kb upstream 5000 false Bd1: 460936-465935 Brachypodium distachyon
Bradi1g00567 5.0kb downstream 5.0kb downstream 12412 true Bd1: 448524-460935 Brachypodium distachyon
Bradi1g00567 5.0kb downstream 5.0kb downstream 5000 false Bd1: 448524-453523 Brachypodium distachyon
Bradi1g00567 10.0kb upstream 10.0kb upstream 17412 true Bd1: 453524-470935 Brachypodium distachyon
Bradi1g00567 10.0kb upstream 10.0kb upstream 10000 false Bd1: 460936-470935 Brachypodium distachyon
Bradi1g00567 10.0kb downstream 10.0kb downstream 17412 true Bd1: 443524-460935 Brachypodium distachyon
Bradi1g00567 10.0kb downstream 10.0kb downstream 10000 false Bd1: 443524-453523 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580503 5269 Grass View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.344        
cufflinks 3.916        
cufflinks 4.829       High
cufflinks 3.36        
cufflinks 2.515       Low
cufflinks 3.758        
cufflinks 3.208        
cufflinks 3.749        
cufflinks 4.026        
cufflinks 3.22        
cufflinks 5.084       High
cufflinks 4.231        
cufflinks 3.792        
cufflinks 3.513        
cufflinks 3.156        
cufflinks 4.07        
cufflinks 2.514       Low
cufflinks 5.264       High
cufflinks 3.229        
cufflinks 2.302       Low
cufflinks 2.984        
cufflinks 5.2       High
cufflinks 3.55        
cufflinks 3.497        
cufflinks 3.154        
cufflinks 4.323        
cufflinks 4.637        
cufflinks 4.525        
cufflinks 4.345        
cufflinks 3.75        

0 Strain