Gene : Bradi1g03930 B. distachyon v3.1
Defline:  (1 of 1) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  487
Name:  ? Bradi1g03930 Secondary Identifier:  ? PAC:32804498
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g03930 0.5kb upstream 0.5kb upstream 5503 true Bd1: 2633563-2639065 Brachypodium distachyon
Bradi1g03930 0.5kb upstream 0.5kb upstream 500 false Bd1: 2638566-2639065 Brachypodium distachyon
Bradi1g03930 0.5kb downstream 0.5kb downstream 5503 true Bd1: 2633063-2638565 Brachypodium distachyon
Bradi1g03930 0.5kb downstream 0.5kb downstream 500 false Bd1: 2633063-2633562 Brachypodium distachyon
Bradi1g03930 1.0kb upstream 1.0kb upstream 6003 true Bd1: 2633563-2639565 Brachypodium distachyon
Bradi1g03930 1.0kb upstream 1.0kb upstream 1000 false Bd1: 2638566-2639565 Brachypodium distachyon
Bradi1g03930 1.0kb downstream 1.0kb downstream 6003 true Bd1: 2632563-2638565 Brachypodium distachyon
Bradi1g03930 1.0kb downstream 1.0kb downstream 1000 false Bd1: 2632563-2633562 Brachypodium distachyon
Bradi1g03930 2.0kb upstream 2.0kb upstream 7003 true Bd1: 2633563-2640565 Brachypodium distachyon
Bradi1g03930 2.0kb upstream 2.0kb upstream 2000 false Bd1: 2638566-2640565 Brachypodium distachyon
Bradi1g03930 2.0kb downstream 2.0kb downstream 7003 true Bd1: 2631563-2638565 Brachypodium distachyon
Bradi1g03930 2.0kb downstream 2.0kb downstream 2000 false Bd1: 2631563-2633562 Brachypodium distachyon
Bradi1g03930 5.0kb upstream 5.0kb upstream 10003 true Bd1: 2633563-2643565 Brachypodium distachyon
Bradi1g03930 5.0kb upstream 5.0kb upstream 5000 false Bd1: 2638566-2643565 Brachypodium distachyon
Bradi1g03930 5.0kb downstream 5.0kb downstream 10003 true Bd1: 2628563-2638565 Brachypodium distachyon
Bradi1g03930 5.0kb downstream 5.0kb downstream 5000 false Bd1: 2628563-2633562 Brachypodium distachyon
Bradi1g03930 10.0kb upstream 10.0kb upstream 15003 true Bd1: 2633563-2648565 Brachypodium distachyon
Bradi1g03930 10.0kb upstream 10.0kb upstream 10000 false Bd1: 2638566-2648565 Brachypodium distachyon
Bradi1g03930 10.0kb downstream 10.0kb downstream 15003 true Bd1: 2623563-2638565 Brachypodium distachyon
Bradi1g03930 10.0kb downstream 10.0kb downstream 10000 false Bd1: 2623563-2633562 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
124573041 5269 Grass View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.518        
cufflinks 1.933        
cufflinks 2.216        
cufflinks 2.11        
cufflinks 2.652        
cufflinks 1.721        
cufflinks 1.825        
cufflinks 2.306        
cufflinks 1.858        
cufflinks 3.647       High
cufflinks 2.272        
cufflinks 1.383       Low
cufflinks 1.503       Low
cufflinks 1.77        
cufflinks 1.709       Low
cufflinks 1.981        
cufflinks 3.504       High
cufflinks 3.018        
cufflinks 4.34       High
cufflinks 7.029       High
cufflinks 3.469       High
cufflinks 2.06        
cufflinks 2.051        
cufflinks 1.76        
cufflinks 1.882        
cufflinks 2.913        
cufflinks 2.277        
cufflinks 2.995        
cufflinks 2.623        
cufflinks 2.047        

0 Strain