Gene : Bradi1g05660 B. distachyon v3.1
Defline:  (1 of 3) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) Genomic Order:  709
Name:  ? Bradi1g05660 Secondary Identifier:  ? PAC:32802901
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05660 0.5kb upstream 0.5kb upstream 11914 true Bd1: 3831987-3843900 Brachypodium distachyon
Bradi1g05660 0.5kb upstream 0.5kb upstream 500 false Bd1: 3843401-3843900 Brachypodium distachyon
Bradi1g05660 0.5kb downstream 0.5kb downstream 11914 true Bd1: 3831487-3843400 Brachypodium distachyon
Bradi1g05660 0.5kb downstream 0.5kb downstream 500 false Bd1: 3831487-3831986 Brachypodium distachyon
Bradi1g05660 1.0kb upstream 1.0kb upstream 12414 true Bd1: 3831987-3844400 Brachypodium distachyon
Bradi1g05660 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3843401-3844400 Brachypodium distachyon
Bradi1g05660 1.0kb downstream 1.0kb downstream 12414 true Bd1: 3830987-3843400 Brachypodium distachyon
Bradi1g05660 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3830987-3831986 Brachypodium distachyon
Bradi1g05660 2.0kb upstream 2.0kb upstream 13414 true Bd1: 3831987-3845400 Brachypodium distachyon
Bradi1g05660 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3843401-3845400 Brachypodium distachyon
Bradi1g05660 2.0kb downstream 2.0kb downstream 13414 true Bd1: 3829987-3843400 Brachypodium distachyon
Bradi1g05660 2.0kb downstream 2.0kb downstream 2000 false Bd1: 3829987-3831986 Brachypodium distachyon
Bradi1g05660 5.0kb upstream 5.0kb upstream 16414 true Bd1: 3831987-3848400 Brachypodium distachyon
Bradi1g05660 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3843401-3848400 Brachypodium distachyon
Bradi1g05660 5.0kb downstream 5.0kb downstream 16414 true Bd1: 3826987-3843400 Brachypodium distachyon
Bradi1g05660 5.0kb downstream 5.0kb downstream 5000 false Bd1: 3826987-3831986 Brachypodium distachyon
Bradi1g05660 10.0kb upstream 10.0kb upstream 21414 true Bd1: 3831987-3853400 Brachypodium distachyon
Bradi1g05660 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3843401-3853400 Brachypodium distachyon
Bradi1g05660 10.0kb downstream 10.0kb downstream 21414 true Bd1: 3821987-3843400 Brachypodium distachyon
Bradi1g05660 10.0kb downstream 10.0kb downstream 10000 false Bd1: 3821987-3831986 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582971 5269 Grass View MSA
122042624 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.433        
cufflinks 7.36        
cufflinks 8.518        
cufflinks 5.533        
cufflinks 3.635       Low
cufflinks 7.128        
cufflinks 6.343        
cufflinks 6.373        
cufflinks 7.047        
cufflinks 5.295        
cufflinks 6.17        
cufflinks 6.683        
cufflinks 5.77        
cufflinks 4.463        
cufflinks 4.806        
cufflinks 7.537        
cufflinks 4.95        
cufflinks 11.023       High
cufflinks 8.865       High
cufflinks 2.88       Low
cufflinks 5.674        
cufflinks 9.129       High
cufflinks 6.185        
cufflinks 5.828        
cufflinks 5.02        
cufflinks 7.22        
cufflinks 6.294        
cufflinks 7.4        
cufflinks 7.408        
cufflinks 8.032        

0 Strain