Gene : Bradi1g05742 B. distachyon v3.1
Defline:  (1 of 3) PTHR36411:SF2 - PHOTOSYSTEM II REACTION CENTER PROTEIN T Genomic Order:  5025
Name:  ? Bradi1g05742 Secondary Identifier:  ? PAC:32793297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05742 0.5kb upstream 0.5kb upstream 729 true Bd1: 35952689-35953417 Brachypodium distachyon
Bradi1g05742 0.5kb upstream 0.5kb upstream 500 false Bd1: 35952689-35953188 Brachypodium distachyon
Bradi1g05742 0.5kb downstream 0.5kb downstream 729 true Bd1: 35953189-35953917 Brachypodium distachyon
Bradi1g05742 0.5kb downstream 0.5kb downstream 500 false Bd1: 35953418-35953917 Brachypodium distachyon
Bradi1g05742 1.0kb upstream 1.0kb upstream 1229 true Bd1: 35952189-35953417 Brachypodium distachyon
Bradi1g05742 1.0kb upstream 1.0kb upstream 1000 false Bd1: 35952189-35953188 Brachypodium distachyon
Bradi1g05742 1.0kb downstream 1.0kb downstream 1229 true Bd1: 35953189-35954417 Brachypodium distachyon
Bradi1g05742 1.0kb downstream 1.0kb downstream 1000 false Bd1: 35953418-35954417 Brachypodium distachyon
Bradi1g05742 2.0kb upstream 2.0kb upstream 2229 true Bd1: 35951189-35953417 Brachypodium distachyon
Bradi1g05742 2.0kb upstream 2.0kb upstream 2000 false Bd1: 35951189-35953188 Brachypodium distachyon
Bradi1g05742 2.0kb downstream 2.0kb downstream 2229 true Bd1: 35953189-35955417 Brachypodium distachyon
Bradi1g05742 2.0kb downstream 2.0kb downstream 2000 false Bd1: 35953418-35955417 Brachypodium distachyon
Bradi1g05742 5.0kb upstream 5.0kb upstream 5229 true Bd1: 35948189-35953417 Brachypodium distachyon
Bradi1g05742 5.0kb upstream 5.0kb upstream 5000 false Bd1: 35948189-35953188 Brachypodium distachyon
Bradi1g05742 5.0kb downstream 5.0kb downstream 5229 true Bd1: 35953189-35958417 Brachypodium distachyon
Bradi1g05742 5.0kb downstream 5.0kb downstream 5000 false Bd1: 35953418-35958417 Brachypodium distachyon
Bradi1g05742 10.0kb upstream 10.0kb upstream 10229 true Bd1: 35943189-35953417 Brachypodium distachyon
Bradi1g05742 10.0kb upstream 10.0kb upstream 10000 false Bd1: 35943189-35953188 Brachypodium distachyon
Bradi1g05742 10.0kb downstream 10.0kb downstream 10229 true Bd1: 35953189-35963417 Brachypodium distachyon
Bradi1g05742 10.0kb downstream 10.0kb downstream 10000 false Bd1: 35953418-35963417 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029198 5273 Angiosperm View MSA
124585827 5269 Grass View MSA
121298572 5274 Embryophyte View MSA
123336536 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.116        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain