Gene : Bradi1g01810 B. distachyon v3.1
Defline:  (1 of 2) 4.1.1.19 - Arginine decarboxylase / L-arginine carboxy-lyase Genomic Order:  221
Name:  ? Bradi1g01810 Secondary Identifier:  ? PAC:32800834
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon POLYAMINSYN3-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-43 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01810 0.5kb upstream 0.5kb upstream 6450 true Bd1: 1216358-1222807 Brachypodium distachyon
Bradi1g01810 0.5kb upstream 0.5kb upstream 500 false Bd1: 1216358-1216857 Brachypodium distachyon
Bradi1g01810 0.5kb downstream 0.5kb downstream 6450 true Bd1: 1216858-1223307 Brachypodium distachyon
Bradi1g01810 0.5kb downstream 0.5kb downstream 500 false Bd1: 1222808-1223307 Brachypodium distachyon
Bradi1g01810 1.0kb upstream 1.0kb upstream 6950 true Bd1: 1215858-1222807 Brachypodium distachyon
Bradi1g01810 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1215858-1216857 Brachypodium distachyon
Bradi1g01810 1.0kb downstream 1.0kb downstream 6950 true Bd1: 1216858-1223807 Brachypodium distachyon
Bradi1g01810 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1222808-1223807 Brachypodium distachyon
Bradi1g01810 2.0kb upstream 2.0kb upstream 7950 true Bd1: 1214858-1222807 Brachypodium distachyon
Bradi1g01810 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1214858-1216857 Brachypodium distachyon
Bradi1g01810 2.0kb downstream 2.0kb downstream 7950 true Bd1: 1216858-1224807 Brachypodium distachyon
Bradi1g01810 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1222808-1224807 Brachypodium distachyon
Bradi1g01810 5.0kb upstream 5.0kb upstream 10950 true Bd1: 1211858-1222807 Brachypodium distachyon
Bradi1g01810 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1211858-1216857 Brachypodium distachyon
Bradi1g01810 5.0kb downstream 5.0kb downstream 10950 true Bd1: 1216858-1227807 Brachypodium distachyon
Bradi1g01810 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1222808-1227807 Brachypodium distachyon
Bradi1g01810 10.0kb upstream 10.0kb upstream 15950 true Bd1: 1206858-1222807 Brachypodium distachyon
Bradi1g01810 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1206858-1216857 Brachypodium distachyon
Bradi1g01810 10.0kb downstream 10.0kb downstream 15950 true Bd1: 1216858-1232807 Brachypodium distachyon
Bradi1g01810 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1222808-1232807 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582148 5269 Grass View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.15        
cufflinks 0.571       High
cufflinks 0.327        
cufflinks 0.495       High
cufflinks 0.075     Low Low
cufflinks 0.248        
cufflinks 0.394       High
cufflinks 0.157        
cufflinks 0.216        
cufflinks 0.074     Low Low
cufflinks 0.133        
cufflinks 0.163        
cufflinks 0.063       Low
cufflinks 0.09        
cufflinks 0.11        
cufflinks 0.283        
cufflinks 0.159     Low  
cufflinks 0.239        
cufflinks 0.158     Low  
cufflinks 0.026     Low Low
cufflinks 0.156        
cufflinks 0.172        
cufflinks 0.128        
cufflinks 0.191        
cufflinks 0.288        
cufflinks 0.25        
cufflinks 0.099        
cufflinks 0.194        
cufflinks 0.163        
cufflinks 0.223        

0 Strain