Gene : Bradi1g02510 B. distachyon v3.1
Defline:  (1 of 3) PTHR13301//PTHR13301:SF73 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  315
Name:  ? Bradi1g02510 Secondary Identifier:  ? PAC:32806918
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-1001 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g02510 0.5kb upstream 0.5kb upstream 6966 true Bd1: 1698765-1705730 Brachypodium distachyon
Bradi1g02510 0.5kb upstream 0.5kb upstream 500 false Bd1: 1705231-1705730 Brachypodium distachyon
Bradi1g02510 0.5kb downstream 0.5kb downstream 6966 true Bd1: 1698265-1705230 Brachypodium distachyon
Bradi1g02510 0.5kb downstream 0.5kb downstream 500 false Bd1: 1698265-1698764 Brachypodium distachyon
Bradi1g02510 1.0kb upstream 1.0kb upstream 7466 true Bd1: 1698765-1706230 Brachypodium distachyon
Bradi1g02510 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1705231-1706230 Brachypodium distachyon
Bradi1g02510 1.0kb downstream 1.0kb downstream 7466 true Bd1: 1697765-1705230 Brachypodium distachyon
Bradi1g02510 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1697765-1698764 Brachypodium distachyon
Bradi1g02510 2.0kb upstream 2.0kb upstream 8466 true Bd1: 1698765-1707230 Brachypodium distachyon
Bradi1g02510 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1705231-1707230 Brachypodium distachyon
Bradi1g02510 2.0kb downstream 2.0kb downstream 8466 true Bd1: 1696765-1705230 Brachypodium distachyon
Bradi1g02510 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1696765-1698764 Brachypodium distachyon
Bradi1g02510 5.0kb upstream 5.0kb upstream 11466 true Bd1: 1698765-1710230 Brachypodium distachyon
Bradi1g02510 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1705231-1710230 Brachypodium distachyon
Bradi1g02510 5.0kb downstream 5.0kb downstream 11466 true Bd1: 1693765-1705230 Brachypodium distachyon
Bradi1g02510 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1693765-1698764 Brachypodium distachyon
Bradi1g02510 10.0kb upstream 10.0kb upstream 16466 true Bd1: 1698765-1715230 Brachypodium distachyon
Bradi1g02510 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1705231-1715230 Brachypodium distachyon
Bradi1g02510 10.0kb downstream 10.0kb downstream 16466 true Bd1: 1688765-1705230 Brachypodium distachyon
Bradi1g02510 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1688765-1698764 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582866 5269 Grass View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.599     High  
cufflinks 56.128     High  
cufflinks 52.908     High  
cufflinks 44.305     High  
cufflinks 22.974     High  
cufflinks 52.052     High  
cufflinks 49.783     High  
cufflinks 53.04     High  
cufflinks 51.162     High  
cufflinks 23.793     High  
cufflinks 11.527     High Low
cufflinks 65.12     High  
cufflinks 21.519     High  
cufflinks 7.128       Low
cufflinks 47.531     High  
cufflinks 52.11     High  
cufflinks 26.585     High  
cufflinks 100.034     High High
cufflinks 40.258     High  
cufflinks 6.575       Low
cufflinks 52.984     High  
cufflinks 51.005     High  
cufflinks 52.187     High  
cufflinks 53.507     High  
cufflinks 39.316     High  
cufflinks 39.726     High  
cufflinks 9.194     High Low
cufflinks 35.53     High  
cufflinks 41.051     High  
cufflinks 132.214     High High

0 Strain