Gene : Bradi1g03130 B. distachyon v3.1
Defline:  (1 of 3) PTHR11820 - FUMARYLACETOACETATE HYDROLASE Genomic Order:  388
Name:  ? Bradi1g03130 Secondary Identifier:  ? PAC:32794128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g03130 0.5kb upstream 0.5kb upstream 3301 true Bd1: 2059092-2062392 Brachypodium distachyon
Bradi1g03130 0.5kb upstream 0.5kb upstream 500 false Bd1: 2061893-2062392 Brachypodium distachyon
Bradi1g03130 0.5kb downstream 0.5kb downstream 3301 true Bd1: 2058592-2061892 Brachypodium distachyon
Bradi1g03130 0.5kb downstream 0.5kb downstream 500 false Bd1: 2058592-2059091 Brachypodium distachyon
Bradi1g03130 1.0kb upstream 1.0kb upstream 3801 true Bd1: 2059092-2062892 Brachypodium distachyon
Bradi1g03130 1.0kb upstream 1.0kb upstream 1000 false Bd1: 2061893-2062892 Brachypodium distachyon
Bradi1g03130 1.0kb downstream 1.0kb downstream 3801 true Bd1: 2058092-2061892 Brachypodium distachyon
Bradi1g03130 1.0kb downstream 1.0kb downstream 1000 false Bd1: 2058092-2059091 Brachypodium distachyon
Bradi1g03130 2.0kb upstream 2.0kb upstream 4801 true Bd1: 2059092-2063892 Brachypodium distachyon
Bradi1g03130 2.0kb upstream 2.0kb upstream 2000 false Bd1: 2061893-2063892 Brachypodium distachyon
Bradi1g03130 2.0kb downstream 2.0kb downstream 4801 true Bd1: 2057092-2061892 Brachypodium distachyon
Bradi1g03130 2.0kb downstream 2.0kb downstream 2000 false Bd1: 2057092-2059091 Brachypodium distachyon
Bradi1g03130 5.0kb upstream 5.0kb upstream 7801 true Bd1: 2059092-2066892 Brachypodium distachyon
Bradi1g03130 5.0kb upstream 5.0kb upstream 5000 false Bd1: 2061893-2066892 Brachypodium distachyon
Bradi1g03130 5.0kb downstream 5.0kb downstream 7801 true Bd1: 2054092-2061892 Brachypodium distachyon
Bradi1g03130 5.0kb downstream 5.0kb downstream 5000 false Bd1: 2054092-2059091 Brachypodium distachyon
Bradi1g03130 10.0kb upstream 10.0kb upstream 12801 true Bd1: 2059092-2071892 Brachypodium distachyon
Bradi1g03130 10.0kb upstream 10.0kb upstream 10000 false Bd1: 2061893-2071892 Brachypodium distachyon
Bradi1g03130 10.0kb downstream 10.0kb downstream 12801 true Bd1: 2049092-2061892 Brachypodium distachyon
Bradi1g03130 10.0kb downstream 10.0kb downstream 10000 false Bd1: 2049092-2059091 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571812 5269 Grass View MSA
122046320 5273 Angiosperm View MSA
121345844 5274 Embryophyte View MSA
123427728 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.765     High  
cufflinks 9.562        
cufflinks 13.564     High  
cufflinks 13.912     High  
cufflinks 11.818     High  
cufflinks 8.399       Low
cufflinks 9.38        
cufflinks 10.127     High  
cufflinks 8.146       Low
cufflinks 18.985     High High
cufflinks 9.002     High  
cufflinks 7.813       Low
cufflinks 7.746     High Low
cufflinks 7.827     High Low
cufflinks 9.95     High  
cufflinks 9.238        
cufflinks 14.563     High  
cufflinks 14.765     High  
cufflinks 22.29     High High
cufflinks 31.205     High High
cufflinks 14.453     High  
cufflinks 13.603     High  
cufflinks 10.733     High  
cufflinks 9.674     High  
cufflinks 9.999     High  
cufflinks 19.106     High High
cufflinks 7.712       Low
cufflinks 20.462     High High
cufflinks 17.325     High  
cufflinks 11.92     High  

0 Strain