Gene : Bradi1g03392 B. distachyon v3.1
Defline:  (1 of 6) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  422
Name:  ? Bradi1g03392 Secondary Identifier:  ? PAC:32803895
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g03392 0.5kb upstream 0.5kb upstream 1985 true Bd1: 2218804-2220788 Brachypodium distachyon
Bradi1g03392 0.5kb upstream 0.5kb upstream 500 false Bd1: 2218804-2219303 Brachypodium distachyon
Bradi1g03392 0.5kb downstream 0.5kb downstream 1985 true Bd1: 2219304-2221288 Brachypodium distachyon
Bradi1g03392 0.5kb downstream 0.5kb downstream 500 false Bd1: 2220789-2221288 Brachypodium distachyon
Bradi1g03392 1.0kb upstream 1.0kb upstream 2485 true Bd1: 2218304-2220788 Brachypodium distachyon
Bradi1g03392 1.0kb upstream 1.0kb upstream 1000 false Bd1: 2218304-2219303 Brachypodium distachyon
Bradi1g03392 1.0kb downstream 1.0kb downstream 2485 true Bd1: 2219304-2221788 Brachypodium distachyon
Bradi1g03392 1.0kb downstream 1.0kb downstream 1000 false Bd1: 2220789-2221788 Brachypodium distachyon
Bradi1g03392 2.0kb upstream 2.0kb upstream 3485 true Bd1: 2217304-2220788 Brachypodium distachyon
Bradi1g03392 2.0kb upstream 2.0kb upstream 2000 false Bd1: 2217304-2219303 Brachypodium distachyon
Bradi1g03392 2.0kb downstream 2.0kb downstream 3485 true Bd1: 2219304-2222788 Brachypodium distachyon
Bradi1g03392 2.0kb downstream 2.0kb downstream 2000 false Bd1: 2220789-2222788 Brachypodium distachyon
Bradi1g03392 5.0kb upstream 5.0kb upstream 6485 true Bd1: 2214304-2220788 Brachypodium distachyon
Bradi1g03392 5.0kb upstream 5.0kb upstream 5000 false Bd1: 2214304-2219303 Brachypodium distachyon
Bradi1g03392 5.0kb downstream 5.0kb downstream 6485 true Bd1: 2219304-2225788 Brachypodium distachyon
Bradi1g03392 5.0kb downstream 5.0kb downstream 5000 false Bd1: 2220789-2225788 Brachypodium distachyon
Bradi1g03392 10.0kb upstream 10.0kb upstream 11485 true Bd1: 2209304-2220788 Brachypodium distachyon
Bradi1g03392 10.0kb upstream 10.0kb upstream 10000 false Bd1: 2209304-2219303 Brachypodium distachyon
Bradi1g03392 10.0kb downstream 10.0kb downstream 11485 true Bd1: 2219304-2230788 Brachypodium distachyon
Bradi1g03392 10.0kb downstream 10.0kb downstream 10000 false Bd1: 2220789-2230788 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026306 5273 Angiosperm View MSA
124587984 5269 Grass View MSA
121351018 5274 Embryophyte View MSA
123381974 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.705        
cufflinks 0.392        
cufflinks 0.666        
cufflinks 0.564        
cufflinks 0.147        
cufflinks 0.405        
cufflinks 0.658        
cufflinks 0.562        
cufflinks 0.561        
cufflinks 0.9        
cufflinks 0.045     Low Low
cufflinks 0.283        
cufflinks 0.019     Low Low
cufflinks 0.015     Low Low
cufflinks 0.11       Low
cufflinks 0.715        
cufflinks 1.375       High
cufflinks 1.077        
cufflinks 1.477       High
cufflinks 0.611        
cufflinks 0.442        
cufflinks 0.561        
cufflinks 0.692        
cufflinks 0.426        
cufflinks 0.602        
cufflinks 0.65        
cufflinks 0.066     Low Low
cufflinks 0.797        
cufflinks 0.567        
cufflinks 0.861        

0 Strain