Gene : Bradi1g09310 B. distachyon v3.1
Defline:  (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1) Genomic Order:  1194
Name:  ? Bradi1g09310 Secondary Identifier:  ? PAC:32795954
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09310 0.5kb upstream 0.5kb upstream 17145 true Bd1: 6680410-6697554 Brachypodium distachyon
Bradi1g09310 0.5kb upstream 0.5kb upstream 500 false Bd1: 6697055-6697554 Brachypodium distachyon
Bradi1g09310 0.5kb downstream 0.5kb downstream 17145 true Bd1: 6679910-6697054 Brachypodium distachyon
Bradi1g09310 0.5kb downstream 0.5kb downstream 500 false Bd1: 6679910-6680409 Brachypodium distachyon
Bradi1g09310 1.0kb upstream 1.0kb upstream 17645 true Bd1: 6680410-6698054 Brachypodium distachyon
Bradi1g09310 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6697055-6698054 Brachypodium distachyon
Bradi1g09310 1.0kb downstream 1.0kb downstream 17645 true Bd1: 6679410-6697054 Brachypodium distachyon
Bradi1g09310 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6679410-6680409 Brachypodium distachyon
Bradi1g09310 2.0kb upstream 2.0kb upstream 18645 true Bd1: 6680410-6699054 Brachypodium distachyon
Bradi1g09310 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6697055-6699054 Brachypodium distachyon
Bradi1g09310 2.0kb downstream 2.0kb downstream 18645 true Bd1: 6678410-6697054 Brachypodium distachyon
Bradi1g09310 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6678410-6680409 Brachypodium distachyon
Bradi1g09310 5.0kb upstream 5.0kb upstream 21645 true Bd1: 6680410-6702054 Brachypodium distachyon
Bradi1g09310 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6697055-6702054 Brachypodium distachyon
Bradi1g09310 5.0kb downstream 5.0kb downstream 21645 true Bd1: 6675410-6697054 Brachypodium distachyon
Bradi1g09310 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6675410-6680409 Brachypodium distachyon
Bradi1g09310 10.0kb upstream 10.0kb upstream 26645 true Bd1: 6680410-6707054 Brachypodium distachyon
Bradi1g09310 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6697055-6707054 Brachypodium distachyon
Bradi1g09310 10.0kb downstream 10.0kb downstream 26645 true Bd1: 6670410-6697054 Brachypodium distachyon
Bradi1g09310 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6670410-6680409 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574538 5269 Grass View MSA
122046807 5273 Angiosperm View MSA
121348670 5274 Embryophyte View MSA
123425696 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.839        
cufflinks 6.886        
cufflinks 8.121       High
cufflinks 4.072        
cufflinks 0.505       Low
cufflinks 5.758        
cufflinks 5.393        
cufflinks 4.122        
cufflinks 5.851        
cufflinks 2.24        
cufflinks 5.666        
cufflinks 7.013        
cufflinks 4.364        
cufflinks 3.218        
cufflinks 1.542        
cufflinks 5.421        
cufflinks 0.847       Low
cufflinks 5.574        
cufflinks 1.354        
cufflinks 0.626       Low
cufflinks 1.315        
cufflinks 8.224       High
cufflinks 4.47        
cufflinks 3.754        
cufflinks 3.441        
cufflinks 6.062        
cufflinks 4.057        
cufflinks 5.89        
cufflinks 5.971        
cufflinks 5.454        

0 Strain