Gene : Bradi1g09729 B. distachyon v3.1
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  1244
Name:  ? Bradi1g09729 Secondary Identifier:  ? PAC:32797063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09729 0.5kb upstream 0.5kb upstream 4424 true Bd1: 6970354-6974777 Brachypodium distachyon
Bradi1g09729 0.5kb upstream 0.5kb upstream 500 false Bd1: 6970354-6970853 Brachypodium distachyon
Bradi1g09729 0.5kb downstream 0.5kb downstream 4424 true Bd1: 6970854-6975277 Brachypodium distachyon
Bradi1g09729 0.5kb downstream 0.5kb downstream 500 false Bd1: 6974778-6975277 Brachypodium distachyon
Bradi1g09729 1.0kb upstream 1.0kb upstream 4924 true Bd1: 6969854-6974777 Brachypodium distachyon
Bradi1g09729 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6969854-6970853 Brachypodium distachyon
Bradi1g09729 1.0kb downstream 1.0kb downstream 4924 true Bd1: 6970854-6975777 Brachypodium distachyon
Bradi1g09729 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6974778-6975777 Brachypodium distachyon
Bradi1g09729 2.0kb upstream 2.0kb upstream 5924 true Bd1: 6968854-6974777 Brachypodium distachyon
Bradi1g09729 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6968854-6970853 Brachypodium distachyon
Bradi1g09729 2.0kb downstream 2.0kb downstream 5924 true Bd1: 6970854-6976777 Brachypodium distachyon
Bradi1g09729 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6974778-6976777 Brachypodium distachyon
Bradi1g09729 5.0kb upstream 5.0kb upstream 8924 true Bd1: 6965854-6974777 Brachypodium distachyon
Bradi1g09729 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6965854-6970853 Brachypodium distachyon
Bradi1g09729 5.0kb downstream 5.0kb downstream 8924 true Bd1: 6970854-6979777 Brachypodium distachyon
Bradi1g09729 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6974778-6979777 Brachypodium distachyon
Bradi1g09729 10.0kb upstream 10.0kb upstream 13924 true Bd1: 6960854-6974777 Brachypodium distachyon
Bradi1g09729 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6960854-6970853 Brachypodium distachyon
Bradi1g09729 10.0kb downstream 10.0kb downstream 13924 true Bd1: 6970854-6984777 Brachypodium distachyon
Bradi1g09729 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6974778-6984777 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576607 5269 Grass View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.075     High Low
cufflinks 74.384     High  
cufflinks 59.261     High  
cufflinks 84.775     High  
cufflinks 53.537     High Low
cufflinks 74.003     High  
cufflinks 72.056     High  
cufflinks 60.898     High  
cufflinks 68.629     High  
cufflinks 61.634     High  
cufflinks 92.77     High High
cufflinks 69.819     High  
cufflinks 84.496     High  
cufflinks 78.538     High  
cufflinks 78.446     High  
cufflinks 69.237     High  
cufflinks 64.878     High  
cufflinks 94.147     High High
cufflinks 74.648     High  
cufflinks 103.771     High High
cufflinks 71.952     High  
cufflinks 52.012     High Low
cufflinks 60.203     High  
cufflinks 71.943     High  
cufflinks 79.791     High  
cufflinks 70.164     High  
cufflinks 89.779     High  
cufflinks 64.964     High  
cufflinks 60.943     High  
cufflinks 69.363     High  

0 Strain