Gene : Bradi1g09760 B. distachyon v3.1
Defline:  (1 of 3) PF05479 - Photosystem I reaction centre subunit N (PSAN or PSI-N) (PsaN) Genomic Order:  1247
Name:  ? Bradi1g09760 Secondary Identifier:  ? PAC:32795255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09760 0.5kb upstream 0.5kb upstream 1936 true Bd1: 6992449-6994384 Brachypodium distachyon
Bradi1g09760 0.5kb upstream 0.5kb upstream 500 false Bd1: 6993885-6994384 Brachypodium distachyon
Bradi1g09760 0.5kb downstream 0.5kb downstream 1936 true Bd1: 6991949-6993884 Brachypodium distachyon
Bradi1g09760 0.5kb downstream 0.5kb downstream 500 false Bd1: 6991949-6992448 Brachypodium distachyon
Bradi1g09760 1.0kb upstream 1.0kb upstream 2436 true Bd1: 6992449-6994884 Brachypodium distachyon
Bradi1g09760 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6993885-6994884 Brachypodium distachyon
Bradi1g09760 1.0kb downstream 1.0kb downstream 2436 true Bd1: 6991449-6993884 Brachypodium distachyon
Bradi1g09760 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6991449-6992448 Brachypodium distachyon
Bradi1g09760 2.0kb upstream 2.0kb upstream 3436 true Bd1: 6992449-6995884 Brachypodium distachyon
Bradi1g09760 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6993885-6995884 Brachypodium distachyon
Bradi1g09760 2.0kb downstream 2.0kb downstream 3436 true Bd1: 6990449-6993884 Brachypodium distachyon
Bradi1g09760 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6990449-6992448 Brachypodium distachyon
Bradi1g09760 5.0kb upstream 5.0kb upstream 6436 true Bd1: 6992449-6998884 Brachypodium distachyon
Bradi1g09760 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6993885-6998884 Brachypodium distachyon
Bradi1g09760 5.0kb downstream 5.0kb downstream 6436 true Bd1: 6987449-6993884 Brachypodium distachyon
Bradi1g09760 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6987449-6992448 Brachypodium distachyon
Bradi1g09760 10.0kb upstream 10.0kb upstream 11436 true Bd1: 6992449-7003884 Brachypodium distachyon
Bradi1g09760 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6993885-7003884 Brachypodium distachyon
Bradi1g09760 10.0kb downstream 10.0kb downstream 11436 true Bd1: 6982449-6993884 Brachypodium distachyon
Bradi1g09760 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6982449-6992448 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583609 5269 Grass View MSA
122050730 5273 Angiosperm View MSA
121348092 5274 Embryophyte View MSA
123425572 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.521     High  
cufflinks 79.064     High  
cufflinks 75.416     High  
cufflinks 120.095     High  
cufflinks 42.609     High  
cufflinks 65.663     High  
cufflinks 64.565     High  
cufflinks 77.95     High  
cufflinks 69.894     High  
cufflinks 114.558     High  
cufflinks 50.954     High  
cufflinks 68.459     High  
cufflinks 77.204     High  
cufflinks 80.501     High  
cufflinks 102.166     High  
cufflinks 59.655     High  
cufflinks 80.939     High  
cufflinks 3.398       Low
cufflinks 42.071     High  
cufflinks 18.908     High Low
cufflinks 56.411     High  
cufflinks 74.321     High  
cufflinks 73.336     High  
cufflinks 85.817     High  
cufflinks 88.993     High  
cufflinks 125.771     High  
cufflinks 73.822     High  
cufflinks 96.408     High  
cufflinks 85.133     High  
cufflinks 60.332     High  

0 Strain