Gene : Bradi1g06470 B. distachyon v3.1
Defline:  (1 of 1) PTHR10926:SF29 - ALA-INTERACTING SUBUNIT 2-RELATED Genomic Order:  833
Name:  ? Bradi1g06470 Secondary Identifier:  ? PAC:32801697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g06470 0.5kb upstream 0.5kb upstream 4774 true Bd1: 4346825-4351598 Brachypodium distachyon
Bradi1g06470 0.5kb upstream 0.5kb upstream 500 false Bd1: 4351099-4351598 Brachypodium distachyon
Bradi1g06470 0.5kb downstream 0.5kb downstream 4774 true Bd1: 4346325-4351098 Brachypodium distachyon
Bradi1g06470 0.5kb downstream 0.5kb downstream 500 false Bd1: 4346325-4346824 Brachypodium distachyon
Bradi1g06470 1.0kb upstream 1.0kb upstream 5274 true Bd1: 4346825-4352098 Brachypodium distachyon
Bradi1g06470 1.0kb upstream 1.0kb upstream 1000 false Bd1: 4351099-4352098 Brachypodium distachyon
Bradi1g06470 1.0kb downstream 1.0kb downstream 5274 true Bd1: 4345825-4351098 Brachypodium distachyon
Bradi1g06470 1.0kb downstream 1.0kb downstream 1000 false Bd1: 4345825-4346824 Brachypodium distachyon
Bradi1g06470 2.0kb upstream 2.0kb upstream 6274 true Bd1: 4346825-4353098 Brachypodium distachyon
Bradi1g06470 2.0kb upstream 2.0kb upstream 2000 false Bd1: 4351099-4353098 Brachypodium distachyon
Bradi1g06470 2.0kb downstream 2.0kb downstream 6274 true Bd1: 4344825-4351098 Brachypodium distachyon
Bradi1g06470 2.0kb downstream 2.0kb downstream 2000 false Bd1: 4344825-4346824 Brachypodium distachyon
Bradi1g06470 5.0kb upstream 5.0kb upstream 9274 true Bd1: 4346825-4356098 Brachypodium distachyon
Bradi1g06470 5.0kb upstream 5.0kb upstream 5000 false Bd1: 4351099-4356098 Brachypodium distachyon
Bradi1g06470 5.0kb downstream 5.0kb downstream 9274 true Bd1: 4341825-4351098 Brachypodium distachyon
Bradi1g06470 5.0kb downstream 5.0kb downstream 5000 false Bd1: 4341825-4346824 Brachypodium distachyon
Bradi1g06470 10.0kb upstream 10.0kb upstream 14274 true Bd1: 4346825-4361098 Brachypodium distachyon
Bradi1g06470 10.0kb upstream 10.0kb upstream 10000 false Bd1: 4351099-4361098 Brachypodium distachyon
Bradi1g06470 10.0kb downstream 10.0kb downstream 14274 true Bd1: 4336825-4351098 Brachypodium distachyon
Bradi1g06470 10.0kb downstream 10.0kb downstream 10000 false Bd1: 4336825-4346824 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576258 5269 Grass View MSA
122046235 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.192       Low
cufflinks 1.706        
cufflinks 1.754        
cufflinks 1.879        
cufflinks 1.795        
cufflinks 1.708        
cufflinks 1.657        
cufflinks 1.477        
cufflinks 1.652        
cufflinks 2.035        
cufflinks 1.394        
cufflinks 1.596        
cufflinks 1.415        
cufflinks 1.415        
cufflinks 1.409        
cufflinks 1.652        
cufflinks 2.26       High
cufflinks 2.479       High
cufflinks 3.027       High
cufflinks 1.111       Low
cufflinks 2.272       High
cufflinks 1.758        
cufflinks 1.443        
cufflinks 1.756        
cufflinks 1.732        
cufflinks 2.147        
cufflinks 1.424        
cufflinks 1.884        
cufflinks 1.7        
cufflinks 2.213       High

0 Strain