Gene : Bradi1g07441 B. distachyon v3.1
Defline:  (1 of 1) PTHR33596:SF1 - COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED Genomic Order:  960
Name:  ? Bradi1g07441 Secondary Identifier:  ? PAC:32805017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g07441 0.5kb upstream 0.5kb upstream 2918 true Bd1: 5219625-5222542 Brachypodium distachyon
Bradi1g07441 0.5kb upstream 0.5kb upstream 500 false Bd1: 5222043-5222542 Brachypodium distachyon
Bradi1g07441 0.5kb downstream 0.5kb downstream 2918 true Bd1: 5219125-5222042 Brachypodium distachyon
Bradi1g07441 0.5kb downstream 0.5kb downstream 500 false Bd1: 5219125-5219624 Brachypodium distachyon
Bradi1g07441 1.0kb upstream 1.0kb upstream 3418 true Bd1: 5219625-5223042 Brachypodium distachyon
Bradi1g07441 1.0kb upstream 1.0kb upstream 1000 false Bd1: 5222043-5223042 Brachypodium distachyon
Bradi1g07441 1.0kb downstream 1.0kb downstream 3418 true Bd1: 5218625-5222042 Brachypodium distachyon
Bradi1g07441 1.0kb downstream 1.0kb downstream 1000 false Bd1: 5218625-5219624 Brachypodium distachyon
Bradi1g07441 2.0kb upstream 2.0kb upstream 4418 true Bd1: 5219625-5224042 Brachypodium distachyon
Bradi1g07441 2.0kb upstream 2.0kb upstream 2000 false Bd1: 5222043-5224042 Brachypodium distachyon
Bradi1g07441 2.0kb downstream 2.0kb downstream 4418 true Bd1: 5217625-5222042 Brachypodium distachyon
Bradi1g07441 2.0kb downstream 2.0kb downstream 2000 false Bd1: 5217625-5219624 Brachypodium distachyon
Bradi1g07441 5.0kb upstream 5.0kb upstream 7418 true Bd1: 5219625-5227042 Brachypodium distachyon
Bradi1g07441 5.0kb upstream 5.0kb upstream 5000 false Bd1: 5222043-5227042 Brachypodium distachyon
Bradi1g07441 5.0kb downstream 5.0kb downstream 7418 true Bd1: 5214625-5222042 Brachypodium distachyon
Bradi1g07441 5.0kb downstream 5.0kb downstream 5000 false Bd1: 5214625-5219624 Brachypodium distachyon
Bradi1g07441 10.0kb upstream 10.0kb upstream 12418 true Bd1: 5219625-5232042 Brachypodium distachyon
Bradi1g07441 10.0kb upstream 10.0kb upstream 10000 false Bd1: 5222043-5232042 Brachypodium distachyon
Bradi1g07441 10.0kb downstream 10.0kb downstream 12418 true Bd1: 5209625-5222042 Brachypodium distachyon
Bradi1g07441 10.0kb downstream 10.0kb downstream 10000 false Bd1: 5209625-5219624 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573957 5269 Grass View MSA
122043105 5273 Angiosperm View MSA
121346555 5274 Embryophyte View MSA
123380405 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 179.038     High High
cufflinks 25.229     High  
cufflinks 17.191     High  
cufflinks 21.615     High  
cufflinks 346.371     High High
cufflinks 31.186     High  
cufflinks 36.448     High  
cufflinks 32.093     High  
cufflinks 28.524     High  
cufflinks 32.927     High  
cufflinks 21.411     High  
cufflinks 26.893     High  
cufflinks 23.963     High  
cufflinks 19.193     High  
cufflinks 37.686     High  
cufflinks 22.57     High  
cufflinks 35.415     High  
cufflinks 26.002     High  
cufflinks 236.446     High High
cufflinks 376.155     High High
cufflinks 30.961     High  
cufflinks 21.47     High  
cufflinks 46.794     High  
cufflinks 34.99     High  
cufflinks 40.167     High  
cufflinks 23.82     High  
cufflinks 15.865     High Low
cufflinks 30.558     High  
cufflinks 27.378     High  
cufflinks 44.783     High  

0 Strain