Gene : Bradi1g07370 B. distachyon v3.1
Defline:  (1 of 1) PTHR21569:SF2 - 30S RIBOSOMAL PROTEIN S9, CHLOROPLASTIC Genomic Order:  952
Name:  ? Bradi1g07370 Secondary Identifier:  ? PAC:32794924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g07370 0.5kb upstream 0.5kb upstream 3429 true Bd1: 5179416-5182844 Brachypodium distachyon
Bradi1g07370 0.5kb upstream 0.5kb upstream 500 false Bd1: 5179416-5179915 Brachypodium distachyon
Bradi1g07370 0.5kb downstream 0.5kb downstream 3429 true Bd1: 5179916-5183344 Brachypodium distachyon
Bradi1g07370 0.5kb downstream 0.5kb downstream 500 false Bd1: 5182845-5183344 Brachypodium distachyon
Bradi1g07370 1.0kb upstream 1.0kb upstream 3929 true Bd1: 5178916-5182844 Brachypodium distachyon
Bradi1g07370 1.0kb upstream 1.0kb upstream 1000 false Bd1: 5178916-5179915 Brachypodium distachyon
Bradi1g07370 1.0kb downstream 1.0kb downstream 3929 true Bd1: 5179916-5183844 Brachypodium distachyon
Bradi1g07370 1.0kb downstream 1.0kb downstream 1000 false Bd1: 5182845-5183844 Brachypodium distachyon
Bradi1g07370 2.0kb upstream 2.0kb upstream 4929 true Bd1: 5177916-5182844 Brachypodium distachyon
Bradi1g07370 2.0kb upstream 2.0kb upstream 2000 false Bd1: 5177916-5179915 Brachypodium distachyon
Bradi1g07370 2.0kb downstream 2.0kb downstream 4929 true Bd1: 5179916-5184844 Brachypodium distachyon
Bradi1g07370 2.0kb downstream 2.0kb downstream 2000 false Bd1: 5182845-5184844 Brachypodium distachyon
Bradi1g07370 5.0kb upstream 5.0kb upstream 7929 true Bd1: 5174916-5182844 Brachypodium distachyon
Bradi1g07370 5.0kb upstream 5.0kb upstream 5000 false Bd1: 5174916-5179915 Brachypodium distachyon
Bradi1g07370 5.0kb downstream 5.0kb downstream 7929 true Bd1: 5179916-5187844 Brachypodium distachyon
Bradi1g07370 5.0kb downstream 5.0kb downstream 5000 false Bd1: 5182845-5187844 Brachypodium distachyon
Bradi1g07370 10.0kb upstream 10.0kb upstream 12929 true Bd1: 5169916-5182844 Brachypodium distachyon
Bradi1g07370 10.0kb upstream 10.0kb upstream 10000 false Bd1: 5169916-5179915 Brachypodium distachyon
Bradi1g07370 10.0kb downstream 10.0kb downstream 12929 true Bd1: 5179916-5192844 Brachypodium distachyon
Bradi1g07370 10.0kb downstream 10.0kb downstream 10000 false Bd1: 5182845-5192844 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588685 5269 Grass View MSA
122043582 5273 Angiosperm View MSA
121345989 5274 Embryophyte View MSA
123426879 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.949     High  
cufflinks 40.512     High  
cufflinks 36.671     High  
cufflinks 47.2     High  
cufflinks 39.577     High  
cufflinks 31.296     High  
cufflinks 40.625     High  
cufflinks 32.28     High  
cufflinks 27.947     High  
cufflinks 52.406     High  
cufflinks 14.542     High  
cufflinks 26.326     High  
cufflinks 20.402     High  
cufflinks 19.58     High  
cufflinks 29.701     High  
cufflinks 38.897     High  
cufflinks 74.076     High High
cufflinks 2.714       Low
cufflinks 71.316     High High
cufflinks 7.609       Low
cufflinks 36.904     High  
cufflinks 31.701     High  
cufflinks 29.934     High  
cufflinks 28.191     High  
cufflinks 38.499     High  
cufflinks 43.911     High  
cufflinks 11.686     High Low
cufflinks 48.762     High  
cufflinks 44.595     High  
cufflinks 34.475     High  

0 Strain