Gene : Bradi1g15060 B. distachyon v3.1
Defline:  (1 of 1) PTHR22870//PTHR22870:SF170 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION FAMILY PROTEIN Genomic Order:  1918
Name:  ? Bradi1g15060 Secondary Identifier:  ? PAC:32796518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g15060 0.5kb upstream 0.5kb upstream 6950 true Bd1: 12062702-12069651 Brachypodium distachyon
Bradi1g15060 0.5kb upstream 0.5kb upstream 500 false Bd1: 12069152-12069651 Brachypodium distachyon
Bradi1g15060 0.5kb downstream 0.5kb downstream 6950 true Bd1: 12062202-12069151 Brachypodium distachyon
Bradi1g15060 0.5kb downstream 0.5kb downstream 500 false Bd1: 12062202-12062701 Brachypodium distachyon
Bradi1g15060 1.0kb upstream 1.0kb upstream 7450 true Bd1: 12062702-12070151 Brachypodium distachyon
Bradi1g15060 1.0kb upstream 1.0kb upstream 1000 false Bd1: 12069152-12070151 Brachypodium distachyon
Bradi1g15060 1.0kb downstream 1.0kb downstream 7450 true Bd1: 12061702-12069151 Brachypodium distachyon
Bradi1g15060 1.0kb downstream 1.0kb downstream 1000 false Bd1: 12061702-12062701 Brachypodium distachyon
Bradi1g15060 2.0kb upstream 2.0kb upstream 8450 true Bd1: 12062702-12071151 Brachypodium distachyon
Bradi1g15060 2.0kb upstream 2.0kb upstream 2000 false Bd1: 12069152-12071151 Brachypodium distachyon
Bradi1g15060 2.0kb downstream 2.0kb downstream 8450 true Bd1: 12060702-12069151 Brachypodium distachyon
Bradi1g15060 2.0kb downstream 2.0kb downstream 2000 false Bd1: 12060702-12062701 Brachypodium distachyon
Bradi1g15060 5.0kb upstream 5.0kb upstream 11450 true Bd1: 12062702-12074151 Brachypodium distachyon
Bradi1g15060 5.0kb upstream 5.0kb upstream 5000 false Bd1: 12069152-12074151 Brachypodium distachyon
Bradi1g15060 5.0kb downstream 5.0kb downstream 11450 true Bd1: 12057702-12069151 Brachypodium distachyon
Bradi1g15060 5.0kb downstream 5.0kb downstream 5000 false Bd1: 12057702-12062701 Brachypodium distachyon
Bradi1g15060 10.0kb upstream 10.0kb upstream 16450 true Bd1: 12062702-12079151 Brachypodium distachyon
Bradi1g15060 10.0kb upstream 10.0kb upstream 10000 false Bd1: 12069152-12079151 Brachypodium distachyon
Bradi1g15060 10.0kb downstream 10.0kb downstream 16450 true Bd1: 12052702-12069151 Brachypodium distachyon
Bradi1g15060 10.0kb downstream 10.0kb downstream 10000 false Bd1: 12052702-12062701 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572544 5269 Grass View MSA
122046241 5273 Angiosperm View MSA
121310578 5274 Embryophyte View MSA
123348026 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.577       Low
cufflinks 4.066        
cufflinks 4.148        
cufflinks 3.789        
cufflinks 3.979        
cufflinks 3.929        
cufflinks 3.483        
cufflinks 4.074        
cufflinks 4.395        
cufflinks 3.841        
cufflinks 4.007        
cufflinks 3.863        
cufflinks 3.778        
cufflinks 3.596        
cufflinks 3.47        
cufflinks 3.58        
cufflinks 3.301        
cufflinks 3.272        
cufflinks 3.881        
cufflinks 3.885        
cufflinks 2.731       Low
cufflinks 4.398        
cufflinks 3.875        
cufflinks 4.03        
cufflinks 3.628        
cufflinks 4.311        
cufflinks 4.964       High
cufflinks 4.335        
cufflinks 4.276        
cufflinks 2.566       Low

0 Strain