Gene : Bradi1g11760 B. distachyon v3.1
Defline:  (1 of 1) PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Genomic Order:  1477
Name:  ? Bradi1g11760 Secondary Identifier:  ? PAC:32800000
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g11760 0.5kb upstream 0.5kb upstream 3986 true Bd1: 8745781-8749766 Brachypodium distachyon
Bradi1g11760 0.5kb upstream 0.5kb upstream 500 false Bd1: 8749267-8749766 Brachypodium distachyon
Bradi1g11760 0.5kb downstream 0.5kb downstream 3986 true Bd1: 8745281-8749266 Brachypodium distachyon
Bradi1g11760 0.5kb downstream 0.5kb downstream 500 false Bd1: 8745281-8745780 Brachypodium distachyon
Bradi1g11760 1.0kb upstream 1.0kb upstream 4486 true Bd1: 8745781-8750266 Brachypodium distachyon
Bradi1g11760 1.0kb upstream 1.0kb upstream 1000 false Bd1: 8749267-8750266 Brachypodium distachyon
Bradi1g11760 1.0kb downstream 1.0kb downstream 4486 true Bd1: 8744781-8749266 Brachypodium distachyon
Bradi1g11760 1.0kb downstream 1.0kb downstream 1000 false Bd1: 8744781-8745780 Brachypodium distachyon
Bradi1g11760 2.0kb upstream 2.0kb upstream 5486 true Bd1: 8745781-8751266 Brachypodium distachyon
Bradi1g11760 2.0kb upstream 2.0kb upstream 2000 false Bd1: 8749267-8751266 Brachypodium distachyon
Bradi1g11760 2.0kb downstream 2.0kb downstream 5486 true Bd1: 8743781-8749266 Brachypodium distachyon
Bradi1g11760 2.0kb downstream 2.0kb downstream 2000 false Bd1: 8743781-8745780 Brachypodium distachyon
Bradi1g11760 5.0kb upstream 5.0kb upstream 8486 true Bd1: 8745781-8754266 Brachypodium distachyon
Bradi1g11760 5.0kb upstream 5.0kb upstream 5000 false Bd1: 8749267-8754266 Brachypodium distachyon
Bradi1g11760 5.0kb downstream 5.0kb downstream 8486 true Bd1: 8740781-8749266 Brachypodium distachyon
Bradi1g11760 5.0kb downstream 5.0kb downstream 5000 false Bd1: 8740781-8745780 Brachypodium distachyon
Bradi1g11760 10.0kb upstream 10.0kb upstream 13486 true Bd1: 8745781-8759266 Brachypodium distachyon
Bradi1g11760 10.0kb upstream 10.0kb upstream 10000 false Bd1: 8749267-8759266 Brachypodium distachyon
Bradi1g11760 10.0kb downstream 10.0kb downstream 13486 true Bd1: 8735781-8749266 Brachypodium distachyon
Bradi1g11760 10.0kb downstream 10.0kb downstream 10000 false Bd1: 8735781-8745780 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587098 5269 Grass View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.45       High
cufflinks 4.783        
cufflinks 3.991        
cufflinks 3.993        
cufflinks 1.514       Low
cufflinks 3.58        
cufflinks 3.484        
cufflinks 4.061        
cufflinks 3.253        
cufflinks 1.914        
cufflinks 1.716       Low
cufflinks 5.716       High
cufflinks 1.201       Low
cufflinks 1.208       Low
cufflinks 2.104        
cufflinks 3.403        
cufflinks 2.188        
cufflinks 7.951       High
cufflinks 2.693        
cufflinks 1.51       Low
cufflinks 4.611        
cufflinks 3.651        
cufflinks 3.657        
cufflinks 2.689        
cufflinks 2.614        
cufflinks 3.368        
cufflinks 1.759       Low
cufflinks 3.273        
cufflinks 3.59        
cufflinks 4.639        

0 Strain