Gene : Bradi1g12010 B. distachyon v3.1
Defline:  (1 of 7) PF06136 - Domain of unknown function (DUF966) (DUF966) Genomic Order:  1508
Name:  ? Bradi1g12010 Secondary Identifier:  ? PAC:32800871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12010 0.5kb upstream 0.5kb upstream 5894 true Bd1: 8921436-8927329 Brachypodium distachyon
Bradi1g12010 0.5kb upstream 0.5kb upstream 500 false Bd1: 8921436-8921935 Brachypodium distachyon
Bradi1g12010 0.5kb downstream 0.5kb downstream 5894 true Bd1: 8921936-8927829 Brachypodium distachyon
Bradi1g12010 0.5kb downstream 0.5kb downstream 500 false Bd1: 8927330-8927829 Brachypodium distachyon
Bradi1g12010 1.0kb upstream 1.0kb upstream 6394 true Bd1: 8920936-8927329 Brachypodium distachyon
Bradi1g12010 1.0kb upstream 1.0kb upstream 1000 false Bd1: 8920936-8921935 Brachypodium distachyon
Bradi1g12010 1.0kb downstream 1.0kb downstream 6394 true Bd1: 8921936-8928329 Brachypodium distachyon
Bradi1g12010 1.0kb downstream 1.0kb downstream 1000 false Bd1: 8927330-8928329 Brachypodium distachyon
Bradi1g12010 2.0kb upstream 2.0kb upstream 7394 true Bd1: 8919936-8927329 Brachypodium distachyon
Bradi1g12010 2.0kb upstream 2.0kb upstream 2000 false Bd1: 8919936-8921935 Brachypodium distachyon
Bradi1g12010 2.0kb downstream 2.0kb downstream 7394 true Bd1: 8921936-8929329 Brachypodium distachyon
Bradi1g12010 2.0kb downstream 2.0kb downstream 2000 false Bd1: 8927330-8929329 Brachypodium distachyon
Bradi1g12010 5.0kb upstream 5.0kb upstream 10394 true Bd1: 8916936-8927329 Brachypodium distachyon
Bradi1g12010 5.0kb upstream 5.0kb upstream 5000 false Bd1: 8916936-8921935 Brachypodium distachyon
Bradi1g12010 5.0kb downstream 5.0kb downstream 10394 true Bd1: 8921936-8932329 Brachypodium distachyon
Bradi1g12010 5.0kb downstream 5.0kb downstream 5000 false Bd1: 8927330-8932329 Brachypodium distachyon
Bradi1g12010 10.0kb upstream 10.0kb upstream 15394 true Bd1: 8911936-8927329 Brachypodium distachyon
Bradi1g12010 10.0kb upstream 10.0kb upstream 10000 false Bd1: 8911936-8921935 Brachypodium distachyon
Bradi1g12010 10.0kb downstream 10.0kb downstream 15394 true Bd1: 8921936-8937329 Brachypodium distachyon
Bradi1g12010 10.0kb downstream 10.0kb downstream 10000 false Bd1: 8927330-8937329 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570434 5269 Grass View MSA
122050993 5273 Angiosperm View MSA
121349769 5274 Embryophyte View MSA
123381438 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.584        
cufflinks 2.357        
cufflinks 2.135        
cufflinks 2.304        
cufflinks 1.988        
cufflinks 2.289        
cufflinks 2.112        
cufflinks 2.656        
cufflinks 2.508        
cufflinks 1.353        
cufflinks 0.199       Low
cufflinks 2.308        
cufflinks 0.339       Low
cufflinks 0.173       Low
cufflinks 1.552        
cufflinks 1.929        
cufflinks 1.907        
cufflinks 0.641        
cufflinks 1.732        
cufflinks 0.956        
cufflinks 1.629        
cufflinks 1.986        
cufflinks 2.765        
cufflinks 2.463        
cufflinks 2.286        
cufflinks 1.809        
cufflinks 0.364       Low
cufflinks 1.683        
cufflinks 1.975        
cufflinks 4.324       High

0 Strain