Gene : Bradi1g12260 B. distachyon v3.1
Defline:  (1 of 2) PTHR19370:SF109 - FERREDOXIN C2 Genomic Order:  1542
Name:  ? Bradi1g12260 Secondary Identifier:  ? PAC:32802836
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12260 0.5kb upstream 0.5kb upstream 5261 true Bd1: 9183502-9188762 Brachypodium distachyon
Bradi1g12260 0.5kb upstream 0.5kb upstream 500 false Bd1: 9188263-9188762 Brachypodium distachyon
Bradi1g12260 0.5kb downstream 0.5kb downstream 5261 true Bd1: 9183002-9188262 Brachypodium distachyon
Bradi1g12260 0.5kb downstream 0.5kb downstream 500 false Bd1: 9183002-9183501 Brachypodium distachyon
Bradi1g12260 1.0kb upstream 1.0kb upstream 5761 true Bd1: 9183502-9189262 Brachypodium distachyon
Bradi1g12260 1.0kb upstream 1.0kb upstream 1000 false Bd1: 9188263-9189262 Brachypodium distachyon
Bradi1g12260 1.0kb downstream 1.0kb downstream 5761 true Bd1: 9182502-9188262 Brachypodium distachyon
Bradi1g12260 1.0kb downstream 1.0kb downstream 1000 false Bd1: 9182502-9183501 Brachypodium distachyon
Bradi1g12260 2.0kb upstream 2.0kb upstream 6761 true Bd1: 9183502-9190262 Brachypodium distachyon
Bradi1g12260 2.0kb upstream 2.0kb upstream 2000 false Bd1: 9188263-9190262 Brachypodium distachyon
Bradi1g12260 2.0kb downstream 2.0kb downstream 6761 true Bd1: 9181502-9188262 Brachypodium distachyon
Bradi1g12260 2.0kb downstream 2.0kb downstream 2000 false Bd1: 9181502-9183501 Brachypodium distachyon
Bradi1g12260 5.0kb upstream 5.0kb upstream 9761 true Bd1: 9183502-9193262 Brachypodium distachyon
Bradi1g12260 5.0kb upstream 5.0kb upstream 5000 false Bd1: 9188263-9193262 Brachypodium distachyon
Bradi1g12260 5.0kb downstream 5.0kb downstream 9761 true Bd1: 9178502-9188262 Brachypodium distachyon
Bradi1g12260 5.0kb downstream 5.0kb downstream 5000 false Bd1: 9178502-9183501 Brachypodium distachyon
Bradi1g12260 10.0kb upstream 10.0kb upstream 14761 true Bd1: 9183502-9198262 Brachypodium distachyon
Bradi1g12260 10.0kb upstream 10.0kb upstream 10000 false Bd1: 9188263-9198262 Brachypodium distachyon
Bradi1g12260 10.0kb downstream 10.0kb downstream 14761 true Bd1: 9173502-9188262 Brachypodium distachyon
Bradi1g12260 10.0kb downstream 10.0kb downstream 10000 false Bd1: 9173502-9183501 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573779 5269 Grass View MSA
122047270 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121344610 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.761     High  
cufflinks 13.461     High  
cufflinks 15.2     High  
cufflinks 17.844     High  
cufflinks 4.434        
cufflinks 9.391     High  
cufflinks 11.31     High  
cufflinks 8.642        
cufflinks 8.885        
cufflinks 15.243     High  
cufflinks 6.626        
cufflinks 7.498        
cufflinks 8.386     High  
cufflinks 9.882     High  
cufflinks 10.773     High  
cufflinks 9.606     High  
cufflinks 9.648        
cufflinks 1.109       Low
cufflinks 8.679        
cufflinks 1.79       Low
cufflinks 6.655        
cufflinks 12.084     High  
cufflinks 9.507     High  
cufflinks 9.506     High  
cufflinks 11.947     High  
cufflinks 20.446     High High
cufflinks 8.661        
cufflinks 20.881     High High
cufflinks 18.573     High High
cufflinks 7.512        

0 Strain