Gene : Bradi1g12710 B. distachyon v3.1
Defline:  (1 of 1) PTHR31490:SF1 - F19C14.2 PROTEIN-RELATED Genomic Order:  1604
Name:  ? Bradi1g12710 Secondary Identifier:  ? PAC:32792814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12710 0.5kb upstream 0.5kb upstream 3718 true Bd1: 9592949-9596666 Brachypodium distachyon
Bradi1g12710 0.5kb upstream 0.5kb upstream 500 false Bd1: 9596167-9596666 Brachypodium distachyon
Bradi1g12710 0.5kb downstream 0.5kb downstream 3718 true Bd1: 9592449-9596166 Brachypodium distachyon
Bradi1g12710 0.5kb downstream 0.5kb downstream 500 false Bd1: 9592449-9592948 Brachypodium distachyon
Bradi1g12710 1.0kb upstream 1.0kb upstream 4218 true Bd1: 9592949-9597166 Brachypodium distachyon
Bradi1g12710 1.0kb upstream 1.0kb upstream 1000 false Bd1: 9596167-9597166 Brachypodium distachyon
Bradi1g12710 1.0kb downstream 1.0kb downstream 4218 true Bd1: 9591949-9596166 Brachypodium distachyon
Bradi1g12710 1.0kb downstream 1.0kb downstream 1000 false Bd1: 9591949-9592948 Brachypodium distachyon
Bradi1g12710 2.0kb upstream 2.0kb upstream 5218 true Bd1: 9592949-9598166 Brachypodium distachyon
Bradi1g12710 2.0kb upstream 2.0kb upstream 2000 false Bd1: 9596167-9598166 Brachypodium distachyon
Bradi1g12710 2.0kb downstream 2.0kb downstream 5218 true Bd1: 9590949-9596166 Brachypodium distachyon
Bradi1g12710 2.0kb downstream 2.0kb downstream 2000 false Bd1: 9590949-9592948 Brachypodium distachyon
Bradi1g12710 5.0kb upstream 5.0kb upstream 8218 true Bd1: 9592949-9601166 Brachypodium distachyon
Bradi1g12710 5.0kb upstream 5.0kb upstream 5000 false Bd1: 9596167-9601166 Brachypodium distachyon
Bradi1g12710 5.0kb downstream 5.0kb downstream 8218 true Bd1: 9587949-9596166 Brachypodium distachyon
Bradi1g12710 5.0kb downstream 5.0kb downstream 5000 false Bd1: 9587949-9592948 Brachypodium distachyon
Bradi1g12710 10.0kb upstream 10.0kb upstream 13218 true Bd1: 9592949-9606166 Brachypodium distachyon
Bradi1g12710 10.0kb upstream 10.0kb upstream 10000 false Bd1: 9596167-9606166 Brachypodium distachyon
Bradi1g12710 10.0kb downstream 10.0kb downstream 13218 true Bd1: 9582949-9596166 Brachypodium distachyon
Bradi1g12710 10.0kb downstream 10.0kb downstream 10000 false Bd1: 9582949-9592948 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572244 5269 Grass View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.053        
cufflinks 1.237        
cufflinks 1.364        
cufflinks 0.832        
cufflinks 1.015        
cufflinks 1.185        
cufflinks 1.849        
cufflinks 1.549        
cufflinks 1.252        
cufflinks 2.568        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.284        
cufflinks 0.341        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.714        
cufflinks 1.707        
cufflinks 0.507        
cufflinks 9.488       High
cufflinks 0.103     Low Low
cufflinks 0.087     Low Low
cufflinks 0.437        
cufflinks 2.072        
cufflinks 1.533        
cufflinks 1.051        
cufflinks 0.917        
cufflinks 1.458        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.08        
cufflinks 1.651        
cufflinks 3.01        

0 Strain