Gene : Bradi1g19710 B. distachyon v3.1
Defline:  (1 of 1) PTHR21013 - ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR Genomic Order:  2460
Name:  ? Bradi1g19710 Secondary Identifier:  ? PAC:32793107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g19710 0.5kb upstream 0.5kb upstream 3124 true Bd1: 15786075-15789198 Brachypodium distachyon
Bradi1g19710 0.5kb upstream 0.5kb upstream 500 false Bd1: 15786075-15786574 Brachypodium distachyon
Bradi1g19710 0.5kb downstream 0.5kb downstream 3124 true Bd1: 15786575-15789698 Brachypodium distachyon
Bradi1g19710 0.5kb downstream 0.5kb downstream 500 false Bd1: 15789199-15789698 Brachypodium distachyon
Bradi1g19710 1.0kb upstream 1.0kb upstream 3624 true Bd1: 15785575-15789198 Brachypodium distachyon
Bradi1g19710 1.0kb upstream 1.0kb upstream 1000 false Bd1: 15785575-15786574 Brachypodium distachyon
Bradi1g19710 1.0kb downstream 1.0kb downstream 3624 true Bd1: 15786575-15790198 Brachypodium distachyon
Bradi1g19710 1.0kb downstream 1.0kb downstream 1000 false Bd1: 15789199-15790198 Brachypodium distachyon
Bradi1g19710 2.0kb upstream 2.0kb upstream 4624 true Bd1: 15784575-15789198 Brachypodium distachyon
Bradi1g19710 2.0kb upstream 2.0kb upstream 2000 false Bd1: 15784575-15786574 Brachypodium distachyon
Bradi1g19710 2.0kb downstream 2.0kb downstream 4624 true Bd1: 15786575-15791198 Brachypodium distachyon
Bradi1g19710 2.0kb downstream 2.0kb downstream 2000 false Bd1: 15789199-15791198 Brachypodium distachyon
Bradi1g19710 5.0kb upstream 5.0kb upstream 7624 true Bd1: 15781575-15789198 Brachypodium distachyon
Bradi1g19710 5.0kb upstream 5.0kb upstream 5000 false Bd1: 15781575-15786574 Brachypodium distachyon
Bradi1g19710 5.0kb downstream 5.0kb downstream 7624 true Bd1: 15786575-15794198 Brachypodium distachyon
Bradi1g19710 5.0kb downstream 5.0kb downstream 5000 false Bd1: 15789199-15794198 Brachypodium distachyon
Bradi1g19710 10.0kb upstream 10.0kb upstream 12624 true Bd1: 15776575-15789198 Brachypodium distachyon
Bradi1g19710 10.0kb upstream 10.0kb upstream 10000 false Bd1: 15776575-15786574 Brachypodium distachyon
Bradi1g19710 10.0kb downstream 10.0kb downstream 12624 true Bd1: 15786575-15799198 Brachypodium distachyon
Bradi1g19710 10.0kb downstream 10.0kb downstream 10000 false Bd1: 15789199-15799198 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579051 5269 Grass View MSA
122045593 5273 Angiosperm View MSA
121344547 5274 Embryophyte View MSA
123428622 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.717     High  
cufflinks 8.098        
cufflinks 8.424        
cufflinks 10.979     High  
cufflinks 15.656     High High
cufflinks 7.409       Low
cufflinks 7.097       Low
cufflinks 8.798        
cufflinks 9.425        
cufflinks 14.96     High  
cufflinks 7.88        
cufflinks 7.635        
cufflinks 5.513       Low
cufflinks 7.461       Low
cufflinks 9.622     High  
cufflinks 7.36       Low
cufflinks 16.137     High High
cufflinks 13.369     High  
cufflinks 11.0        
cufflinks 22.908     High High
cufflinks 12.987     High  
cufflinks 8.43        
cufflinks 9.505     High  
cufflinks 9.264        
cufflinks 9.228        
cufflinks 11.232     High  
cufflinks 8.101        
cufflinks 10.469        
cufflinks 9.393        
cufflinks 10.112        

0 Strain