Gene : Bradi1g20797 B. distachyon v3.1
Defline:  (1 of 13) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  2599
Name:  ? Bradi1g20797 Secondary Identifier:  ? PAC:32791986
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5080 Brachypodium distachyon pathologic  
Bdistachyon PWY-6433 Brachypodium distachyon pathologic  
Bdistachyon PWY-6598 Brachypodium distachyon pathologic  
Bdistachyon PWY-7036 Brachypodium distachyon pathologic  
Bdistachyon PWY-7601 Brachypodium distachyon pathologic  
Bdistachyon PWY-7606 Brachypodium distachyon pathologic  
Bdistachyon PWY-7619 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g20797 0.5kb upstream 0.5kb upstream 5098 true Bd1: 16698159-16703256 Brachypodium distachyon
Bradi1g20797 0.5kb upstream 0.5kb upstream 500 false Bd1: 16702757-16703256 Brachypodium distachyon
Bradi1g20797 0.5kb downstream 0.5kb downstream 5098 true Bd1: 16697659-16702756 Brachypodium distachyon
Bradi1g20797 0.5kb downstream 0.5kb downstream 500 false Bd1: 16697659-16698158 Brachypodium distachyon
Bradi1g20797 1.0kb upstream 1.0kb upstream 5598 true Bd1: 16698159-16703756 Brachypodium distachyon
Bradi1g20797 1.0kb upstream 1.0kb upstream 1000 false Bd1: 16702757-16703756 Brachypodium distachyon
Bradi1g20797 1.0kb downstream 1.0kb downstream 5598 true Bd1: 16697159-16702756 Brachypodium distachyon
Bradi1g20797 1.0kb downstream 1.0kb downstream 1000 false Bd1: 16697159-16698158 Brachypodium distachyon
Bradi1g20797 2.0kb upstream 2.0kb upstream 6598 true Bd1: 16698159-16704756 Brachypodium distachyon
Bradi1g20797 2.0kb upstream 2.0kb upstream 2000 false Bd1: 16702757-16704756 Brachypodium distachyon
Bradi1g20797 2.0kb downstream 2.0kb downstream 6598 true Bd1: 16696159-16702756 Brachypodium distachyon
Bradi1g20797 2.0kb downstream 2.0kb downstream 2000 false Bd1: 16696159-16698158 Brachypodium distachyon
Bradi1g20797 5.0kb upstream 5.0kb upstream 9598 true Bd1: 16698159-16707756 Brachypodium distachyon
Bradi1g20797 5.0kb upstream 5.0kb upstream 5000 false Bd1: 16702757-16707756 Brachypodium distachyon
Bradi1g20797 5.0kb downstream 5.0kb downstream 9598 true Bd1: 16693159-16702756 Brachypodium distachyon
Bradi1g20797 5.0kb downstream 5.0kb downstream 5000 false Bd1: 16693159-16698158 Brachypodium distachyon
Bradi1g20797 10.0kb upstream 10.0kb upstream 14598 true Bd1: 16698159-16712756 Brachypodium distachyon
Bradi1g20797 10.0kb upstream 10.0kb upstream 10000 false Bd1: 16702757-16712756 Brachypodium distachyon
Bradi1g20797 10.0kb downstream 10.0kb downstream 14598 true Bd1: 16688159-16702756 Brachypodium distachyon
Bradi1g20797 10.0kb downstream 10.0kb downstream 10000 false Bd1: 16688159-16698158 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995624 5273 Angiosperm View MSA
124589060 5269 Grass View MSA
123428985 5275 Viridiplantae View MSA
121265811 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.134        
cufflinks 0.21        
cufflinks 0.271        
cufflinks 0.212        
cufflinks 0.141        
cufflinks 0.284        
cufflinks 0.21        
cufflinks 0.336        
cufflinks 0.255        
cufflinks 0.489        
cufflinks 0.003     Low Low
cufflinks 0.322        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.196        
cufflinks 0.317        
cufflinks 0.319        
cufflinks 0.007     Low Low
cufflinks 0.164     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low Low
cufflinks 0.26        
cufflinks 0.335        
cufflinks 0.414        
cufflinks 0.299        
cufflinks 0.256        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.312        
cufflinks 0.344        
cufflinks 0.209        

0 Strain