Gene : Bradi1g16510 B. distachyon v3.1
Defline:  (1 of 1) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC Genomic Order:  2076
Name:  ? Bradi1g16510 Secondary Identifier:  ? PAC:32794177
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-2261 Brachypodium distachyon pathologic  
Bdistachyon PWY-6959 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g16510 0.5kb upstream 0.5kb upstream 3908 true Bd1: 13364597-13368504 Brachypodium distachyon
Bradi1g16510 0.5kb upstream 0.5kb upstream 500 false Bd1: 13364597-13365096 Brachypodium distachyon
Bradi1g16510 0.5kb downstream 0.5kb downstream 3908 true Bd1: 13365097-13369004 Brachypodium distachyon
Bradi1g16510 0.5kb downstream 0.5kb downstream 500 false Bd1: 13368505-13369004 Brachypodium distachyon
Bradi1g16510 1.0kb upstream 1.0kb upstream 4408 true Bd1: 13364097-13368504 Brachypodium distachyon
Bradi1g16510 1.0kb upstream 1.0kb upstream 1000 false Bd1: 13364097-13365096 Brachypodium distachyon
Bradi1g16510 1.0kb downstream 1.0kb downstream 4408 true Bd1: 13365097-13369504 Brachypodium distachyon
Bradi1g16510 1.0kb downstream 1.0kb downstream 1000 false Bd1: 13368505-13369504 Brachypodium distachyon
Bradi1g16510 2.0kb upstream 2.0kb upstream 5408 true Bd1: 13363097-13368504 Brachypodium distachyon
Bradi1g16510 2.0kb upstream 2.0kb upstream 2000 false Bd1: 13363097-13365096 Brachypodium distachyon
Bradi1g16510 2.0kb downstream 2.0kb downstream 5408 true Bd1: 13365097-13370504 Brachypodium distachyon
Bradi1g16510 2.0kb downstream 2.0kb downstream 2000 false Bd1: 13368505-13370504 Brachypodium distachyon
Bradi1g16510 5.0kb upstream 5.0kb upstream 8408 true Bd1: 13360097-13368504 Brachypodium distachyon
Bradi1g16510 5.0kb upstream 5.0kb upstream 5000 false Bd1: 13360097-13365096 Brachypodium distachyon
Bradi1g16510 5.0kb downstream 5.0kb downstream 8408 true Bd1: 13365097-13373504 Brachypodium distachyon
Bradi1g16510 5.0kb downstream 5.0kb downstream 5000 false Bd1: 13368505-13373504 Brachypodium distachyon
Bradi1g16510 10.0kb upstream 10.0kb upstream 13408 true Bd1: 13355097-13368504 Brachypodium distachyon
Bradi1g16510 10.0kb upstream 10.0kb upstream 10000 false Bd1: 13355097-13365096 Brachypodium distachyon
Bradi1g16510 10.0kb downstream 10.0kb downstream 13408 true Bd1: 13365097-13378504 Brachypodium distachyon
Bradi1g16510 10.0kb downstream 10.0kb downstream 10000 false Bd1: 13368505-13378504 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577492 5269 Grass View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 117.723     High  
cufflinks 102.81     High  
cufflinks 68.058     High Low
cufflinks 109.032     High  
cufflinks 236.977     High High
cufflinks 139.841     High  
cufflinks 114.186     High  
cufflinks 149.455     High  
cufflinks 151.853     High  
cufflinks 87.719     High Low
cufflinks 167.128     High  
cufflinks 117.575     High  
cufflinks 109.7     High  
cufflinks 173.288     High  
cufflinks 119.394     High  
cufflinks 126.419     High  
cufflinks 178.717     High  
cufflinks 173.803     High  
cufflinks 203.194     High High
cufflinks 164.015     High  
cufflinks 166.492     High  
cufflinks 75.514     High Low
cufflinks 164.397     High  
cufflinks 167.118     High  
cufflinks 154.895     High  
cufflinks 65.192     High Low
cufflinks 91.926     High Low
cufflinks 72.777     High Low
cufflinks 73.013     High Low
cufflinks 104.153     High  

0 Strain