Gene : Bradi1g17430 B. distachyon v3.1
Defline:  (1 of 1) PTHR10438//PTHR10438:SF277 - THIOREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  2167
Name:  ? Bradi1g17430 Secondary Identifier:  ? PAC:32801125
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g17430 0.5kb upstream 0.5kb upstream 3244 true Bd1: 13966592-13969835 Brachypodium distachyon
Bradi1g17430 0.5kb upstream 0.5kb upstream 500 false Bd1: 13969336-13969835 Brachypodium distachyon
Bradi1g17430 0.5kb downstream 0.5kb downstream 3244 true Bd1: 13966092-13969335 Brachypodium distachyon
Bradi1g17430 0.5kb downstream 0.5kb downstream 500 false Bd1: 13966092-13966591 Brachypodium distachyon
Bradi1g17430 1.0kb upstream 1.0kb upstream 3744 true Bd1: 13966592-13970335 Brachypodium distachyon
Bradi1g17430 1.0kb upstream 1.0kb upstream 1000 false Bd1: 13969336-13970335 Brachypodium distachyon
Bradi1g17430 1.0kb downstream 1.0kb downstream 3744 true Bd1: 13965592-13969335 Brachypodium distachyon
Bradi1g17430 1.0kb downstream 1.0kb downstream 1000 false Bd1: 13965592-13966591 Brachypodium distachyon
Bradi1g17430 2.0kb upstream 2.0kb upstream 4744 true Bd1: 13966592-13971335 Brachypodium distachyon
Bradi1g17430 2.0kb upstream 2.0kb upstream 2000 false Bd1: 13969336-13971335 Brachypodium distachyon
Bradi1g17430 2.0kb downstream 2.0kb downstream 4744 true Bd1: 13964592-13969335 Brachypodium distachyon
Bradi1g17430 2.0kb downstream 2.0kb downstream 2000 false Bd1: 13964592-13966591 Brachypodium distachyon
Bradi1g17430 5.0kb upstream 5.0kb upstream 7744 true Bd1: 13966592-13974335 Brachypodium distachyon
Bradi1g17430 5.0kb upstream 5.0kb upstream 5000 false Bd1: 13969336-13974335 Brachypodium distachyon
Bradi1g17430 5.0kb downstream 5.0kb downstream 7744 true Bd1: 13961592-13969335 Brachypodium distachyon
Bradi1g17430 5.0kb downstream 5.0kb downstream 5000 false Bd1: 13961592-13966591 Brachypodium distachyon
Bradi1g17430 10.0kb upstream 10.0kb upstream 12744 true Bd1: 13966592-13979335 Brachypodium distachyon
Bradi1g17430 10.0kb upstream 10.0kb upstream 10000 false Bd1: 13969336-13979335 Brachypodium distachyon
Bradi1g17430 10.0kb downstream 10.0kb downstream 12744 true Bd1: 13956592-13969335 Brachypodium distachyon
Bradi1g17430 10.0kb downstream 10.0kb downstream 10000 false Bd1: 13956592-13966591 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576269 5269 Grass View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.006       Low
cufflinks 8.334        
cufflinks 31.814     High High
cufflinks 6.188        
cufflinks 34.742     High High
cufflinks 3.162       Low
cufflinks 7.59        
cufflinks 2.604       Low
cufflinks 1.884       Low
cufflinks 61.678     High High
cufflinks 16.913     High  
cufflinks 4.021        
cufflinks 9.796     High  
cufflinks 6.816        
cufflinks 3.497        
cufflinks 9.656     High  
cufflinks 5.905        
cufflinks 14.71     High  
cufflinks 21.276     High  
cufflinks 17.003     High  
cufflinks 8.454        
cufflinks 34.578     High High
cufflinks 2.698       Low
cufflinks 1.424       Low
cufflinks 2.222       Low
cufflinks 45.739     High High
cufflinks 2.876       Low
cufflinks 48.025     High High
cufflinks 32.511     High High
cufflinks 9.155        

0 Strain