Gene : Bradi1g24980 B. distachyon v3.1
Defline:  (1 of 1) K02636 - cytochrome b6-f complex iron-sulfur subunit (petC) Genomic Order:  3147
Name:  ? Bradi1g24980 Secondary Identifier:  ? PAC:32798354
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PHOTOALL-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-101 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g24980 0.5kb upstream 0.5kb upstream 2790 true Bd1: 20257160-20259949 Brachypodium distachyon
Bradi1g24980 0.5kb upstream 0.5kb upstream 500 false Bd1: 20259450-20259949 Brachypodium distachyon
Bradi1g24980 0.5kb downstream 0.5kb downstream 2790 true Bd1: 20256660-20259449 Brachypodium distachyon
Bradi1g24980 0.5kb downstream 0.5kb downstream 500 false Bd1: 20256660-20257159 Brachypodium distachyon
Bradi1g24980 1.0kb upstream 1.0kb upstream 3290 true Bd1: 20257160-20260449 Brachypodium distachyon
Bradi1g24980 1.0kb upstream 1.0kb upstream 1000 false Bd1: 20259450-20260449 Brachypodium distachyon
Bradi1g24980 1.0kb downstream 1.0kb downstream 3290 true Bd1: 20256160-20259449 Brachypodium distachyon
Bradi1g24980 1.0kb downstream 1.0kb downstream 1000 false Bd1: 20256160-20257159 Brachypodium distachyon
Bradi1g24980 2.0kb upstream 2.0kb upstream 4290 true Bd1: 20257160-20261449 Brachypodium distachyon
Bradi1g24980 2.0kb upstream 2.0kb upstream 2000 false Bd1: 20259450-20261449 Brachypodium distachyon
Bradi1g24980 2.0kb downstream 2.0kb downstream 4290 true Bd1: 20255160-20259449 Brachypodium distachyon
Bradi1g24980 2.0kb downstream 2.0kb downstream 2000 false Bd1: 20255160-20257159 Brachypodium distachyon
Bradi1g24980 5.0kb upstream 5.0kb upstream 7290 true Bd1: 20257160-20264449 Brachypodium distachyon
Bradi1g24980 5.0kb upstream 5.0kb upstream 5000 false Bd1: 20259450-20264449 Brachypodium distachyon
Bradi1g24980 5.0kb downstream 5.0kb downstream 7290 true Bd1: 20252160-20259449 Brachypodium distachyon
Bradi1g24980 5.0kb downstream 5.0kb downstream 5000 false Bd1: 20252160-20257159 Brachypodium distachyon
Bradi1g24980 10.0kb upstream 10.0kb upstream 12290 true Bd1: 20257160-20269449 Brachypodium distachyon
Bradi1g24980 10.0kb upstream 10.0kb upstream 10000 false Bd1: 20259450-20269449 Brachypodium distachyon
Bradi1g24980 10.0kb downstream 10.0kb downstream 12290 true Bd1: 20247160-20259449 Brachypodium distachyon
Bradi1g24980 10.0kb downstream 10.0kb downstream 10000 false Bd1: 20247160-20257159 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569443 5269 Grass View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 665.287     High  
cufflinks 547.505     High  
cufflinks 587.205     High  
cufflinks 618.105     High  
cufflinks 744.275     High  
cufflinks 616.328     High  
cufflinks 703.301     High  
cufflinks 734.167     High  
cufflinks 645.579     High  
cufflinks 589.817     High  
cufflinks 813.225     High  
cufflinks 520.405     High  
cufflinks 987.1     High  
cufflinks 1045.519     High  
cufflinks 734.18     High  
cufflinks 622.665     High  
cufflinks 806.141     High  
cufflinks 5.632       Low
cufflinks 604.649     High  
cufflinks 296.055     High  
cufflinks 294.059     High  
cufflinks 521.763     High  
cufflinks 692.731     High  
cufflinks 699.393     High  
cufflinks 622.436     High  
cufflinks 550.173     High  
cufflinks 1000.014     High  
cufflinks 598.96     High  
cufflinks 620.632     High  
cufflinks 199.667     High  

0 Strain