Gene : Bradi1g21250 B. distachyon v3.1
Defline:  (1 of 421) PF13041 - PPR repeat family (PPR_2) Genomic Order:  2661
Name:  ? Bradi1g21250 Secondary Identifier:  ? PAC:32801672
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g21250 0.5kb upstream 0.5kb upstream 2384 true Bd1: 17104661-17107044 Brachypodium distachyon
Bradi1g21250 0.5kb upstream 0.5kb upstream 500 false Bd1: 17104661-17105160 Brachypodium distachyon
Bradi1g21250 0.5kb downstream 0.5kb downstream 2384 true Bd1: 17105161-17107544 Brachypodium distachyon
Bradi1g21250 0.5kb downstream 0.5kb downstream 500 false Bd1: 17107045-17107544 Brachypodium distachyon
Bradi1g21250 1.0kb upstream 1.0kb upstream 2884 true Bd1: 17104161-17107044 Brachypodium distachyon
Bradi1g21250 1.0kb upstream 1.0kb upstream 1000 false Bd1: 17104161-17105160 Brachypodium distachyon
Bradi1g21250 1.0kb downstream 1.0kb downstream 2884 true Bd1: 17105161-17108044 Brachypodium distachyon
Bradi1g21250 1.0kb downstream 1.0kb downstream 1000 false Bd1: 17107045-17108044 Brachypodium distachyon
Bradi1g21250 2.0kb upstream 2.0kb upstream 3884 true Bd1: 17103161-17107044 Brachypodium distachyon
Bradi1g21250 2.0kb upstream 2.0kb upstream 2000 false Bd1: 17103161-17105160 Brachypodium distachyon
Bradi1g21250 2.0kb downstream 2.0kb downstream 3884 true Bd1: 17105161-17109044 Brachypodium distachyon
Bradi1g21250 2.0kb downstream 2.0kb downstream 2000 false Bd1: 17107045-17109044 Brachypodium distachyon
Bradi1g21250 5.0kb upstream 5.0kb upstream 6884 true Bd1: 17100161-17107044 Brachypodium distachyon
Bradi1g21250 5.0kb upstream 5.0kb upstream 5000 false Bd1: 17100161-17105160 Brachypodium distachyon
Bradi1g21250 5.0kb downstream 5.0kb downstream 6884 true Bd1: 17105161-17112044 Brachypodium distachyon
Bradi1g21250 5.0kb downstream 5.0kb downstream 5000 false Bd1: 17107045-17112044 Brachypodium distachyon
Bradi1g21250 10.0kb upstream 10.0kb upstream 11884 true Bd1: 17095161-17107044 Brachypodium distachyon
Bradi1g21250 10.0kb upstream 10.0kb upstream 10000 false Bd1: 17095161-17105160 Brachypodium distachyon
Bradi1g21250 10.0kb downstream 10.0kb downstream 11884 true Bd1: 17105161-17117044 Brachypodium distachyon
Bradi1g21250 10.0kb downstream 10.0kb downstream 10000 false Bd1: 17107045-17117044 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572061 5269 Grass View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.94        
cufflinks 4.51       High
cufflinks 3.296        
cufflinks 3.412        
cufflinks 0.558       Low
cufflinks 3.331        
cufflinks 3.172        
cufflinks 2.678        
cufflinks 2.862        
cufflinks 1.994        
cufflinks 2.125        
cufflinks 3.15        
cufflinks 1.219        
cufflinks 1.282        
cufflinks 1.822        
cufflinks 3.593        
cufflinks 1.929        
cufflinks 4.751       High
cufflinks 1.235        
cufflinks 0.829       Low
cufflinks 1.949        
cufflinks 2.847        
cufflinks 2.35        
cufflinks 2.312        
cufflinks 2.952        
cufflinks 2.554        
cufflinks 2.083        
cufflinks 2.644        
cufflinks 2.367        
cufflinks 3.955        

0 Strain