Gene : Bradi1g21700 B. distachyon v3.1
Defline:  (1 of 4) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  2717
Name:  ? Bradi1g21700 Secondary Identifier:  ? PAC:32801761
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g21700 0.5kb upstream 0.5kb upstream 2044 true Bd1: 17473096-17475139 Brachypodium distachyon
Bradi1g21700 0.5kb upstream 0.5kb upstream 500 false Bd1: 17474640-17475139 Brachypodium distachyon
Bradi1g21700 0.5kb downstream 0.5kb downstream 2044 true Bd1: 17472596-17474639 Brachypodium distachyon
Bradi1g21700 0.5kb downstream 0.5kb downstream 500 false Bd1: 17472596-17473095 Brachypodium distachyon
Bradi1g21700 1.0kb upstream 1.0kb upstream 2544 true Bd1: 17473096-17475639 Brachypodium distachyon
Bradi1g21700 1.0kb upstream 1.0kb upstream 1000 false Bd1: 17474640-17475639 Brachypodium distachyon
Bradi1g21700 1.0kb downstream 1.0kb downstream 2544 true Bd1: 17472096-17474639 Brachypodium distachyon
Bradi1g21700 1.0kb downstream 1.0kb downstream 1000 false Bd1: 17472096-17473095 Brachypodium distachyon
Bradi1g21700 2.0kb upstream 2.0kb upstream 3544 true Bd1: 17473096-17476639 Brachypodium distachyon
Bradi1g21700 2.0kb upstream 2.0kb upstream 2000 false Bd1: 17474640-17476639 Brachypodium distachyon
Bradi1g21700 2.0kb downstream 2.0kb downstream 3544 true Bd1: 17471096-17474639 Brachypodium distachyon
Bradi1g21700 2.0kb downstream 2.0kb downstream 2000 false Bd1: 17471096-17473095 Brachypodium distachyon
Bradi1g21700 5.0kb upstream 5.0kb upstream 6544 true Bd1: 17473096-17479639 Brachypodium distachyon
Bradi1g21700 5.0kb upstream 5.0kb upstream 5000 false Bd1: 17474640-17479639 Brachypodium distachyon
Bradi1g21700 5.0kb downstream 5.0kb downstream 6544 true Bd1: 17468096-17474639 Brachypodium distachyon
Bradi1g21700 5.0kb downstream 5.0kb downstream 5000 false Bd1: 17468096-17473095 Brachypodium distachyon
Bradi1g21700 10.0kb upstream 10.0kb upstream 11544 true Bd1: 17473096-17484639 Brachypodium distachyon
Bradi1g21700 10.0kb upstream 10.0kb upstream 10000 false Bd1: 17474640-17484639 Brachypodium distachyon
Bradi1g21700 10.0kb downstream 10.0kb downstream 11544 true Bd1: 17463096-17474639 Brachypodium distachyon
Bradi1g21700 10.0kb downstream 10.0kb downstream 10000 false Bd1: 17463096-17473095 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576228 5269 Grass View MSA
122048000 5273 Angiosperm View MSA
121347460 5274 Embryophyte View MSA
123380557 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.637        
cufflinks 6.598        
cufflinks 4.602        
cufflinks 8.641        
cufflinks 5.868        
cufflinks 4.812        
cufflinks 8.393        
cufflinks 3.956        
cufflinks 3.982        
cufflinks 6.404        
cufflinks 3.331        
cufflinks 1.614       Low
cufflinks 3.15        
cufflinks 3.834        
cufflinks 2.45       Low
cufflinks 4.019        
cufflinks 8.197        
cufflinks 3.797        
cufflinks 11.115       High
cufflinks 6.337        
cufflinks 8.524        
cufflinks 3.179        
cufflinks 5.542        
cufflinks 5.11        
cufflinks 7.498        
cufflinks 4.281        
cufflinks 3.503        
cufflinks 7.703        
cufflinks 9.384        
cufflinks 3.615        

0 Strain